Gm54505 Gene Detail

Summary

• Symbol
  Gm54505
• Name
  predicted gene, 54505

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845490
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:47578803-47579034 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  140 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845490	unclassified non-coding RNA gene	Chr16:47578803-47579034 (+)
129S1/SvImJ	ENSMUSG00200021759	unclassified non-coding RNA gene	Chr16:44422998-44423229 (+)
A/J	ENSMUSG00195003508	unclassified non-coding RNA gene	Chr16:44065291-44065522 (+)
AKR/J	ENSMUSG00220022608	unclassified non-coding RNA gene	Chr16:44413264-44413495 (+)
BALB/cJ	ENSMUSG00180029245	unclassified non-coding RNA gene	Chr16:44270075-44270306 (+)
C3H/HeJ	ENSMUSG00175026265	unclassified non-coding RNA gene	Chr16:44587018-44587249 (+)
C57BL/6NJ	ENSMUSG00215009057	unclassified non-coding RNA gene	Chr16:44358327-44358558 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012935	unclassified non-coding RNA gene	Chr16:44735898-44736132 (+)
CBA/J	ENSMUSG00210016904	unclassified non-coding RNA gene	Chr16:44617258-44617489 (+)
DBA/2J	ENSMUSG00185011181	unclassified non-coding RNA gene	Chr16:44449648-44449879 (+)
FVB/NJ	ENSMUSG00205013307	unclassified non-coding RNA gene	Chr16:44334033-44334264 (+)
JF1/MsJ	ENSUMUG00000031398	unclassified non-coding RNA gene	Chr16:44723102-44723333 (+)
LP/J	ENSMUSG00230029450	unclassified non-coding RNA gene	Chr16:47016042-47016273 (+)
NOD/ShiLtJ	ENSMUSG00190018977	unclassified non-coding RNA gene	Chr16:44463469-44463700 (+)
NZO/HlLtJ	ENSMUSG00225028869	unclassified non-coding RNA gene	Chr16:50107887-50108118 (+)
PWK/PhJ	ENSLUMG00010028830	unclassified non-coding RNA gene	Chr16:44557451-44557684 (+)
SPRET/EiJ	ENSMSPG00010007703	unclassified non-coding RNA gene	Chr16:44727848-44728081 (+)
WSB/EiJ	ENSIUOG00005013412	unclassified non-coding RNA gene	Chr16:44632360-44632591 (+)

Homology

• Gene Tree
  Gm54505
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076255 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076255	Ensembl Gene Model | MGI Sequence Detail	232	C57BL/6J
transcript	ENSMUST00020183544	Ensembl | MGI Sequence Detail	232	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;