Gm54502 Gene Detail

Summary

• Symbol
  Gm54502
• Name
  predicted gene, 54502

• Feature Type
  miRNA gene
• IDs
  MGI:6845484
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:127423438-127423558 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  75 from dbSNP Build 142
• Strain Annotations
  24

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845484	miRNA gene	ChrX:127423438-127423558 (-)
129S1/SvImJ	ENSMUSG00200011558	miRNA gene	ChrX:106415794-106415914 (-)
129S1/SvImJ	ENSMUSG00200019104	miRNA gene	Chr9:47162471-47162603 (+)
A/J	ENSMUSG00195020943	miRNA gene	ChrX:110300995-110301115 (-)
A/J	ENSMUSG00195018101	miRNA gene	Chr4:15424516-15424641 (+)
A/J	ENSMUSG00195018125	miRNA gene	Chr4:15430465-15430590 (+)
AKR/J	ENSMUSG00220013237	miRNA gene	ChrX:103933151-103933271 (-)
BALB/cJ	ENSMUSG00180019572	miRNA gene	ChrX:106720655-106720775 (-)
C3H/HeJ	ENSMUSG00175021580	miRNA gene	ChrX:110568615-110568735 (-)
C57BL/6NJ	ENSMUSG00215039484	miRNA gene	Chr9:46919448-46919580 (+)
C57BL/6NJ	ENSMUSG00215002727	miRNA gene	ChrX:107099574-107099694 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008010	miRNA gene	ChrX:107810330-107810450 (-)
CBA/J	ENSMUSG00210020899	miRNA gene	ChrX:107480007-107480127 (-)
CBA/J	ENSMUSG00210017173	miRNA gene	Chr9:47043885-47044017 (+)
DBA/2J	ENSMUSG00185024292	miRNA gene	ChrX:121395894-121396014 (-)
FVB/NJ	ENSMUSG00205012419	miRNA gene	ChrX:106121540-106121660 (-)
JF1/MsJ	ENSUMUG00000010850	miRNA gene	ChrX:140596073-140596193 (-)
LP/J	ENSMUSG00230004137	miRNA gene	ChrX:128069690-128069810 (-)
LP/J	ENSMUSG00230042808	miRNA gene	Chr9:47378344-47378476 (+)
NOD/ShiLtJ	ENSMUSG00190014749	miRNA gene	ChrX:106889112-106889232 (-)
NZO/HlLtJ	ENSMUSG00225045114	miRNA gene	Chr9:47340451-47340583 (+)
NZO/HlLtJ	ENSMUSG00225037235	miRNA gene	ChrX:132735339-132735459 (-)
PWK/PhJ	ENSLUMG00010009225	miRNA gene	ChrX:105207366-105207486 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005005145	miRNA gene	ChrX:107701082-107701202 (-)

Homology

• Gene Tree
  Gm54502
  

Sequences &
Gene Models

• All Sequences
  26

• Ensembl
  ENSMUSG00002075700 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075700	Ensembl Gene Model | MGI Sequence Detail	121	C57BL/6J
transcript	ENSMUST00020181933	Ensembl | MGI Sequence Detail	121	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;