Gm54501 Gene Detail

Summary

• Symbol
  Gm54501
• Name
  predicted gene, 54501

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845482
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:126316053-126316327 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  106 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845482	unclassified non-coding RNA gene	ChrX:126316053-126316327 (+)
129S1/SvImJ	ENSMUSG00200011865	unclassified non-coding RNA gene	ChrX:105310740-105311014 (+)
A/J	ENSMUSG00195020988	unclassified non-coding RNA gene	ChrX:109202836-109203110 (+)
AKR/J	ENSMUSG00220013109	unclassified non-coding RNA gene	ChrX:102830902-102831176 (+)
BALB/cJ	ENSMUSG00180019416	unclassified non-coding RNA gene	ChrX:105622666-105622940 (+)
C3H/HeJ	ENSMUSG00175021610	unclassified non-coding RNA gene	ChrX:109466089-109466363 (+)
C57BL/6NJ	ENSMUSG00215002765	unclassified non-coding RNA gene	ChrX:105992038-105992312 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008137	unclassified non-coding RNA gene	ChrX:106718236-106718510 (+)
CBA/J	ENSMUSG00210021072	unclassified non-coding RNA gene	ChrX:106376779-106377053 (+)
DBA/2J	ENSMUSG00185024719	unclassified non-coding RNA gene	ChrX:120293632-120293906 (+)
FVB/NJ	ENSMUSG00205012457	unclassified non-coding RNA gene	ChrX:105017231-105017505 (+)
JF1/MsJ	ENSUMUG00000011327	unclassified non-coding RNA gene	ChrX:139498625-139498899 (+)
LP/J	ENSMUSG00230004124	unclassified non-coding RNA gene	ChrX:126967886-126968160 (+)
NOD/ShiLtJ	ENSMUSG00190014787	unclassified non-coding RNA gene	ChrX:105787002-105787276 (+)
NZO/HlLtJ	ENSMUSG00225037216	unclassified non-coding RNA gene	ChrX:131633208-131633482 (+)
PWK/PhJ	ENSLUMG00010009379	unclassified non-coding RNA gene	ChrX:104112091-104112365 (+)
SPRET/EiJ	ENSMSPG00010021592	unclassified non-coding RNA gene	ChrX:108727518-108727792 (+)
WSB/EiJ	ENSIUOG00005005179	unclassified non-coding RNA gene	ChrX:106602393-106602667 (+)

Homology

• Gene Tree
  Gm54501
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076322 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076322	Ensembl Gene Model | MGI Sequence Detail	275	C57BL/6J
transcript	ENSMUST00020183750	Ensembl | MGI Sequence Detail	275	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;