Gm54498 Gene Detail

Summary

• Symbol
  Gm54498
• Name
  predicted gene, 54498

• Feature Type
  rRNA gene
• IDs
  MGI:6845476
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:119064321-119064443 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845476	rRNA gene	Chr14:119064321-119064443 (-)
129S1/SvImJ	ENSMUSG00200025016	rRNA gene	Chr14:107939353-107939475 (-)
A/J	ENSMUSG00195032158	rRNA gene	Chr14:107686411-107686533 (-)
AKR/J	ENSMUSG00220007803	rRNA gene	Chr14:107479766-107479888 (-)
BALB/cJ	ENSMUSG00180029489	rRNA gene	Chr14:107178438-107178560 (-)
C3H/HeJ	ENSMUSG00175005808	rRNA gene	Chr14:109114158-109114280 (-)
C57BL/6NJ	ENSMUSG00215026908	rRNA gene	Chr14:107330274-107330396 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007445	rRNA gene	Chr14:108760430-108760552 (-)
CBA/J	ENSMUSG00210027416	rRNA gene	Chr14:108082418-108082540 (-)
DBA/2J	ENSMUSG00185014125	rRNA gene	Chr14:113238856-113238978 (-)
FVB/NJ	ENSMUSG00205008349	rRNA gene	Chr14:106773296-106773418 (-)
JF1/MsJ	ENSUMUG00000030116	rRNA gene	Chr14:124263624-124263746 (-)
LP/J	ENSMUSG00230013071	rRNA gene	Chr14:125228984-125229106 (-)
NOD/ShiLtJ	ENSMUSG00190025784	rRNA gene	Chr14:107887969-107888091 (-)
NZO/HlLtJ	ENSMUSG00225029318	rRNA gene	Chr14:115246967-115247089 (-)
PWK/PhJ	ENSLUMG00010029359	rRNA gene	Chr14:107167862-107167984 (-)
SPRET/EiJ	ENSMSPG00010012286	rRNA gene	Chr14:111397417-111397539 (-)
WSB/EiJ	ENSIUOG00005031703	rRNA gene	Chr14:107108170-107108292 (-)

Homology

• Gene Tree
  Gm54498
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076279 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076279	Ensembl Gene Model | MGI Sequence Detail	123	C57BL/6J
transcript	ENSMUST00020182655	Ensembl | MGI Sequence Detail	123	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;