Gm54496 Gene Detail

Summary

• Symbol
  Gm54496
• Name
  predicted gene, 54496

• Feature Type
  snoRNA gene
• IDs
  MGI:6845472
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:120217914-120218037 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  139 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845472	snoRNA gene	ChrX:120217914-120218037 (-)
129S1/SvImJ	ENSMUSG00200024570	snoRNA gene	ChrX:102055182-102055305 (-)
A/J	ENSMUSG00195020880	snoRNA gene	ChrX:105676716-105676836 (-)
AKR/J	ENSMUSG00220013574	snoRNA gene	ChrX:100059518-100059641 (-)
BALB/cJ	ENSMUSG00180027332	snoRNA gene	ChrX:102308995-102309115 (-)
C3H/HeJ	ENSMUSG00175021807	snoRNA gene	ChrX:105953833-105953953 (-)
C57BL/6NJ	ENSMUSG00215002708	snoRNA gene	ChrX:102682511-102682634 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008067	snoRNA gene	ChrX:103352595-103352715 (-)
CBA/J	ENSMUSG00210020784	snoRNA gene	ChrX:102786810-102786930 (-)
DBA/2J	ENSMUSG00185024073	snoRNA gene	ChrX:115379104-115379227 (-)
FVB/NJ	ENSMUSG00205021007	snoRNA gene	ChrX:101901830-101901953 (-)
JF1/MsJ	ENSUMUG00000011443	snoRNA gene	ChrX:135905347-135905467 (-)
LP/J	ENSMUSG00230003854	snoRNA gene	ChrX:122006473-122006596 (-)
NOD/ShiLtJ	ENSMUSG00190014924	snoRNA gene	ChrX:102124479-102124602 (-)
NZO/HlLtJ	ENSMUSG00225033520	snoRNA gene	ChrX:127179834-127179957 (-)
PWK/PhJ	ENSLUMG00010026949	snoRNA gene	ChrX:101153001-101153121 (-)
SPRET/EiJ	ENSMSPG00010021395	snoRNA gene	ChrX:105713105-105713225 (-)
WSB/EiJ	ENSIUOG00005005082	snoRNA gene	ChrX:102487561-102487684 (-)

Homology

• Gene Tree
  Gm54496
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076256 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076256	Ensembl Gene Model | MGI Sequence Detail	124	C57BL/6J
transcript	ENSMUST00020182234	Ensembl | MGI Sequence Detail	124	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;