Gm54495 Gene Detail

Summary

• Symbol
  Gm54495
• Name
  predicted gene, 54495

• Feature Type
  snoRNA gene
• IDs
  MGI:6845470
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:115658539-115658653 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845470	snoRNA gene	ChrX:115658539-115658653 (+)
129S1/SvImJ	ENSMUSG00200024717	snoRNA gene	ChrX:97477770-97477884 (+)
A/J	ENSMUSG00195026861	snoRNA gene	ChrX:101153138-101153252 (+)
AKR/J	ENSMUSG00220013792	snoRNA gene	ChrX:95454592-95454706 (+)
BALB/cJ	ENSMUSG00180027627	snoRNA gene	ChrX:97805207-97805321 (+)
C3H/HeJ	ENSMUSG00175028736	snoRNA gene	ChrX:101440579-101440693 (+)
C57BL/6NJ	ENSMUSG00215014340	snoRNA gene	ChrX:98137505-98137619 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005021474	snoRNA gene	ChrX:98818387-98818501 (+)
CBA/J	ENSMUSG00210022343	snoRNA gene	ChrX:98278993-98279107 (+)
DBA/2J	ENSMUSG00185029982	snoRNA gene	ChrX:110812791-110812905 (+)
FVB/NJ	ENSMUSG00205020418	snoRNA gene	ChrX:97303111-97303225 (+)
JF1/MsJ	ENSUMUG00000017083	snoRNA gene	ChrX:131373429-131373543 (+)
LP/J	ENSMUSG00230005616	snoRNA gene	ChrX:117440127-117440241 (+)
NOD/ShiLtJ	ENSMUSG00190014051	snoRNA gene	ChrX:97551204-97551318 (+)
NZO/HlLtJ	ENSMUSG00225033704	snoRNA gene	ChrX:122613570-122613684 (+)
PWK/PhJ	ENSLUMG00010026571	snoRNA gene	ChrX:96617102-96617216 (+)
SPRET/EiJ	ENSMSPG00010022114	snoRNA gene	ChrX:101060408-101060423 (+)
WSB/EiJ	ENSIUOG00005015101	snoRNA gene	ChrX:97877287-97877401 (+)

Homology

• Gene Tree
  Gm54495
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075399 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075399	Ensembl Gene Model | MGI Sequence Detail	115	C57BL/6J
transcript	ENSMUST00020182505	Ensembl | MGI Sequence Detail	115	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;