Gm54494 Gene Detail

Summary

• Symbol
  Gm54494
• Name
  predicted gene, 54494

• Feature Type
  miRNA gene
• IDs
  MGI:6845468
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:115033597-115033684 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  69 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845468	miRNA gene	ChrX:115033597-115033684 (+)
129S1/SvImJ	ENSMUSG00200024519	miRNA gene	ChrX:96850569-96850656 (+)
A/J	ENSMUSG00195026818	miRNA gene	ChrX:100535008-100535095 (+)
AKR/J	ENSMUSG00220013467	miRNA gene	ChrX:94822353-94822440 (+)
BALB/cJ	ENSMUSG00180026922	miRNA gene	ChrX:97187152-97187239 (+)
C3H/HeJ	ENSMUSG00175029463	miRNA gene	ChrX:100822454-100822541 (+)
C57BL/6NJ	ENSMUSG00215014748	miRNA gene	ChrX:97512509-97512596 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005021359	miRNA gene	ChrX:98186409-98186496 (+)
CBA/J	ENSMUSG00210022325	miRNA gene	ChrX:97660987-97661074 (+)
DBA/2J	ENSMUSG00185030294	miRNA gene	ChrX:110185656-110185743 (+)
FVB/NJ	ENSMUSG00205020982	miRNA gene	ChrX:96687124-96687211 (+)
JF1/MsJ	ENSUMUG00000017179	miRNA gene	ChrX:130755194-130755281 (+)
LP/J	ENSMUSG00230005572	miRNA gene	ChrX:116812971-116813058 (+)
NOD/ShiLtJ	ENSMUSG00190013906	miRNA gene	ChrX:96922760-96922847 (+)
NZO/HlLtJ	ENSMUSG00225033655	miRNA gene	ChrX:121986440-121986527 (+)
PWK/PhJ	ENSLUMG00010026450	miRNA gene	ChrX:96011921-96012008 (+)
SPRET/EiJ	ENSMSPG00010022343	miRNA gene	ChrX:100419528-100419605 (+)
WSB/EiJ	ENSIUOG00005015001	miRNA gene	ChrX:97249710-97249797 (+)

Homology

• Gene Tree
  Gm54494
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076312 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076312	Ensembl Gene Model | MGI Sequence Detail	88	C57BL/6J
transcript	ENSMUST00020183500	Ensembl | MGI Sequence Detail	88	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;