Gm54493 Gene Detail

Summary

• Symbol
  Gm54493
• Name
  predicted gene, 54493

• Feature Type
  snRNA gene
• IDs
  MGI:6845466
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:114283538-114283661 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  95 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845466	snRNA gene	ChrX:114283538-114283661 (-)
129S1/SvImJ	ENSMUSG00200024794	snRNA gene	ChrX:96116397-96116520 (-)
A/J	ENSMUSG00195026487	snRNA gene	ChrX:99787737-99787860 (-)
AKR/J	ENSMUSG00220013551	snRNA gene	ChrX:94091100-94091223 (-)
BALB/cJ	ENSMUSG00180026572	snRNA gene	ChrX:96439957-96440080 (-)
C3H/HeJ	ENSMUSG00175028843	snRNA gene	ChrX:100047365-100047488 (-)
C57BL/6NJ	ENSMUSG00215014822	snRNA gene	ChrX:96752294-96752417 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005021431	snRNA gene	ChrX:97450601-97450724 (-)
CBA/J	ENSMUSG00210022329	snRNA gene	ChrX:96913781-96913904 (-)
DBA/2J	ENSMUSG00185029932	snRNA gene	ChrX:109451119-109451242 (-)
FVB/NJ	ENSMUSG00205021308	snRNA gene	ChrX:95964168-95964291 (-)
JF1/MsJ	ENSUMUG00000018572	snRNA gene	ChrX:130007956-130008079 (-)
LP/J	ENSMUSG00230005714	snRNA gene	ChrX:116078825-116078948 (-)
NOD/ShiLtJ	ENSMUSG00190013815	snRNA gene	ChrX:96184094-96184217 (-)
NZO/HlLtJ	ENSMUSG00225040903	snRNA gene	ChrX:121252283-121252406 (-)
PWK/PhJ	ENSLUMG00010026483	snRNA gene	ChrX:95260125-95260248 (-)
SPRET/EiJ	ENSMSPG00010022903	snRNA gene	ChrX:99679509-99679632 (-)
WSB/EiJ	ENSIUOG00005015059	snRNA gene	ChrX:96554226-96554349 (-)

Homology

• Gene Tree
  Gm54493
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074939 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074939	Ensembl Gene Model | MGI Sequence Detail	124	C57BL/6J
transcript	ENSMUST00020183720	Ensembl | MGI Sequence Detail	124	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;