Gm54491 Gene Detail

Summary

• Symbol
  Gm54491
• Name
  predicted gene, 54491

• Feature Type
  miRNA gene
• IDs
  MGI:6845462
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:41037709-41037835 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845462	miRNA gene	ChrX:41037709-41037835 (+)
129S1/SvImJ	ENSMUSG00200022049	miRNA gene	ChrX:24979572-24979698 (+)
A/J	ENSMUSG00195025779	miRNA gene	ChrX:27623040-27623166 (+)
AKR/J	ENSMUSG00220024882	miRNA gene	ChrX:24672490-24672616 (+)
BALB/cJ	ENSMUSG00180013004	miRNA gene	ChrX:25398408-25398534 (+)
C3H/HeJ	ENSMUSG00175024527	miRNA gene	ChrX:28384022-28384148 (+)
C57BL/6NJ	ENSMUSG00215026261	miRNA gene	ChrX:25391333-25391459 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033502	miRNA gene	ChrX:27519154-27519280 (+)
CBA/J	ENSMUSG00210035878	miRNA gene	ChrX:25679765-25679891 (+)
DBA/2J	ENSMUSG00185024956	miRNA gene	ChrX:36386122-36386248 (+)
FVB/NJ	ENSMUSG00205007912	miRNA gene	ChrX:24309923-24310049 (+)
JF1/MsJ	ENSUMUG00000030686	miRNA gene	ChrX:55485019-55485143 (+)
LP/J	ENSMUSG00230020288	miRNA gene	ChrX:42883442-42883568 (+)
NOD/ShiLtJ	ENSMUSG00190023222	miRNA gene	ChrX:24853375-24853501 (+)
NZO/HlLtJ	ENSMUSG00225040004	miRNA gene	ChrX:48085033-48085159 (+)
PWK/PhJ	ENSLUMG00010037621	miRNA gene	ChrX:25180707-25180831 (+)
SPRET/EiJ	ENSMSPG00010018342	miRNA gene	ChrX:26568321-26568444 (+)
WSB/EiJ	ENSIUOG00005039219	miRNA gene	ChrX:25847102-25847228 (+)

Homology

• Gene Tree
  Gm54491
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075296 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075296	Ensembl Gene Model | MGI Sequence Detail	127	C57BL/6J
transcript	ENSMUST00020182670	Ensembl | MGI Sequence Detail	127	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;