Gm54487 Gene Detail

Summary

• Symbol
  Gm54487
• Name
  predicted gene, 54487

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845454
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:122282503-122282757 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  114 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845454	unclassified non-coding RNA gene	Chr6:122282503-122282757 (-)
129S1/SvImJ	ENSMUSG00200052303	unclassified non-coding RNA gene	Chr6:119451822-119452070 (-)
A/J	ENSMUSG00195048073	unclassified non-coding RNA gene	Chr6:118866149-118866397 (-)
AKR/J	ENSMUSG00220033258	unclassified non-coding RNA gene	Chr6:117751417-117751665 (-)
BALB/cJ	ENSMUSG00180050125	unclassified non-coding RNA gene	Chr6:119233789-119234037 (-)
C3H/HeJ	ENSMUSG00175050425	unclassified non-coding RNA gene	Chr6:118889015-118889263 (-)
C57BL/6NJ	ENSMUSG00215049637	unclassified non-coding RNA gene	Chr6:119262618-119262872 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005051033	unclassified non-coding RNA gene	Chr6:118916584-118916832 (-)
CBA/J	ENSMUSG00210045881	unclassified non-coding RNA gene	Chr6:119000623-119000871 (-)
DBA/2J	ENSMUSG00185050253	unclassified non-coding RNA gene	Chr6:119637895-119638143 (-)
FVB/NJ	ENSMUSG00205051600	unclassified non-coding RNA gene	Chr6:117940714-117940962 (-)
JF1/MsJ	ENSUMUG00000053870	unclassified non-coding RNA gene	Chr6:118243186-118243441 (-)
LP/J	ENSMUSG00230048877	unclassified non-coding RNA gene	Chr6:120849175-120849423 (-)
NOD/ShiLtJ	ENSMUSG00190052189	unclassified non-coding RNA gene	Chr6:118613529-118613777 (-)
NZO/HlLtJ	ENSMUSG00225017912	unclassified non-coding RNA gene	Chr6:122730473-122730721 (-)
PWK/PhJ	ENSLUMG00010050473	unclassified non-coding RNA gene	Chr6:117566550-117566797 (-)
SPRET/EiJ	ENSMSPG00010047037	unclassified non-coding RNA gene	Chr6:120026018-120026272 (-)
WSB/EiJ	ENSIUOG00005047142	unclassified non-coding RNA gene	Chr6:119249963-119250217 (-)

Homology

• Gene Tree
  Gm54487
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075919 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075919	Ensembl Gene Model | MGI Sequence Detail	255	C57BL/6J
transcript	ENSMUST00020182843	Ensembl | MGI Sequence Detail	255	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;