Gm54482 Gene Detail

Summary

• Symbol
  Gm54482
• Name
  predicted gene, 54482

• Feature Type
  miRNA gene
• IDs
  MGI:6845444
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:87081540-87081635 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  153 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845444	miRNA gene	Chr12:87081540-87081635 (+)
129S1/SvImJ	ENSMUSG00200051778	miRNA gene	Chr12:79097112-79097213 (+)
A/J	ENSMUSG00195034563	miRNA gene	Chr12:81716895-81716994 (+)
AKR/J	ENSMUSG00220049706	miRNA gene	Chr12:79512749-79512848 (+)
BALB/cJ	ENSMUSG00180025980	miRNA gene	Chr12:80754604-80754699 (+)
C3H/HeJ	ENSMUSG00175038865	miRNA gene	Chr12:83847535-83847632 (+)
C57BL/6NJ	ENSMUSG00215047015	miRNA gene	Chr12:80061020-80061115 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210048330	miRNA gene	Chr12:80265996-80266095 (+)
DBA/2J	ENSMUSG00185002990	miRNA gene	Chr12:82117877-82117976 (+)
FVB/NJ	ENSMUSG00205040687	miRNA gene	Chr12:79932544-79932643 (+)
JF1/MsJ	ENSUMUG00000051159	miRNA gene	Chr12:86133681-86133779 (+)
LP/J	ENSMUSG00230045785	miRNA gene	Chr12:89180016-89180115 (+)
NOD/ShiLtJ	ENSMUSG00190048004	miRNA gene	Chr12:79328321-79328422 (+)
NZO/HlLtJ	ENSMUSG00225052702	miRNA gene	Chr12:91217073-91217172 (+)
PWK/PhJ	ENSLUMG00010031018	miRNA gene	Chr12:80143980-80144078 (+)
SPRET/EiJ	ENSMSPG00010001194	miRNA gene	Chr12:81955121-81955222 (+)
WSB/EiJ	ENSIUOG00005045972	miRNA gene	Chr12:79985573-79985686 (+)

Homology

• Gene Tree
  Gm54482
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075870 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075870	Ensembl Gene Model | MGI Sequence Detail	96	C57BL/6J
transcript	ENSMUST00020182165	Ensembl | MGI Sequence Detail	96	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;