Gm54479 Gene Detail

Summary

• Symbol
  Gm54479
• Name
  predicted gene, 54479

• Feature Type
  snRNA gene
• IDs
  MGI:6845438
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:115217860-115217965 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  161 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845438	snRNA gene	Chr14:115217860-115217965 (-)
129S1/SvImJ	ENSMUSG00200024718	snRNA gene	Chr14:104114790-104114895 (-)
A/J	ENSMUSG00195032116	snRNA gene	Chr14:103869415-103869520 (-)
AKR/J	ENSMUSG00220007793	snRNA gene	Chr14:103647375-103647480 (-)
BALB/cJ	ENSMUSG00180029096	snRNA gene	Chr14:103361611-103361716 (-)
C3H/HeJ	ENSMUSG00175005966	snRNA gene	Chr14:105297387-105297492 (-)
C57BL/6NJ	ENSMUSG00215025631	snRNA gene	Chr14:103483100-103483205 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007156	snRNA gene	Chr14:104981840-104981944 (-)
CBA/J	ENSMUSG00210027314	snRNA gene	Chr14:104266066-104266171 (-)
DBA/2J	ENSMUSG00185021652	snRNA gene	Chr14:109422396-109422501 (-)
FVB/NJ	ENSMUSG00205007717	snRNA gene	Chr14:102976840-102976945 (-)
JF1/MsJ	ENSUMUG00000012947	snRNA gene	Chr14:120474125-120474229 (-)
LP/J	ENSMUSG00230002017	snRNA gene	Chr14:121416181-121416286 (-)
NOD/ShiLtJ	ENSMUSG00190027617	snRNA gene	Chr14:104056448-104056553 (-)
NZO/HlLtJ	ENSMUSG00225021912	snRNA gene	Chr14:111418902-111419007 (-)
PWK/PhJ	ENSLUMG00010029279	snRNA gene	Chr14:103326930-103327034 (-)
SPRET/EiJ	ENSMSPG00010012367	snRNA gene	Chr14:107496339-107496444 (-)
WSB/EiJ	ENSIUOG00005031300	snRNA gene	Chr14:103247142-103247247 (-)

Homology

• Gene Tree
  Gm54479
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076961 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076961	Ensembl Gene Model | MGI Sequence Detail	106	C57BL/6J
transcript	ENSMUST00020183557	Ensembl | MGI Sequence Detail	106	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;