Gm54474 Gene Detail

Summary

• Symbol
  Gm54474
• Name
  predicted gene, 54474

• Feature Type
  rRNA gene
• IDs
  MGI:6845428
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:110399267-110399377 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  145 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845428	rRNA gene	Chr14:110399267-110399377 (+)
129S1/SvImJ	ENSMUSG00200018137	rRNA gene	Chr14:98977936-98978046 (+)
A/J	ENSMUSG00195004167	rRNA gene	Chr14:99069699-99069809 (+)
AKR/J	ENSMUSG00220001274	rRNA gene	Chr14:98497591-98497701 (+)
BALB/cJ	ENSMUSG00180010653	rRNA gene	Chr14:98551904-98552014 (+)
C3H/HeJ	ENSMUSG00175014416	rRNA gene	Chr14:100480784-100480894 (+)
C57BL/6NJ	ENSMUSG00215006929	rRNA gene	Chr14:98661301-98661411 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002864	rRNA gene	Chr14:100024992-100025102 (+)
CBA/J	ENSMUSG00210014243	rRNA gene	Chr14:99131757-99131867 (+)
DBA/2J	ENSMUSG00185021287	rRNA gene	Chr14:104301688-104301798 (+)
FVB/NJ	ENSMUSG00205008697	rRNA gene	Chr14:98237068-98237178 (+)
JF1/MsJ	ENSUMUG00000012836	rRNA gene	Chr14:115415397-115415507 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190002014	rRNA gene	Chr14:98991777-98991887 (+)
NZO/HlLtJ	ENSMUSG00225021757	rRNA gene	Chr14:106587350-106587460 (+)
PWK/PhJ	ENSLUMG00010001275	rRNA gene	Chr14:98195120-98195230 (+)
SPRET/EiJ	ENSMSPG00010012754	rRNA gene	Chr14:102314675-102314785 (+)
WSB/EiJ	ENSIUOG00005006422	rRNA gene	Chr14:98149947-98150057 (+)

Homology

• Gene Tree
  Gm54474
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075588 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075588	Ensembl Gene Model | MGI Sequence Detail	111	C57BL/6J
transcript	ENSMUST00020181870	Ensembl | MGI Sequence Detail	111	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;