Gm54473 Gene Detail

Summary

• Symbol
  Gm54473
• Name
  predicted gene, 54473

• Feature Type
  miRNA gene
• IDs
  MGI:6845426
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:110188831-110188926 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  239 from dbSNP Build 142
• Strain Annotations
  11

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845426	miRNA gene	Chr14:110188831-110188926 (+)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195004141	miRNA gene	Chr14:98859214-98859309 (+)
AKR/J	ENSMUSG00220001258	miRNA gene	Chr14:98287123-98287218 (+)
BALB/cJ	ENSMUSG00180010619	miRNA gene	Chr14:98341424-98341521 (+)
C3H/HeJ	ENSMUSG00175014439	miRNA gene	Chr14:100270295-100270392 (+)
C57BL/6NJ	ENSMUSG00215006862	miRNA gene	Chr14:98450801-98450896 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210014218	miRNA gene	Chr14:98921295-98921392 (+)
DBA/2J	no annotation
FVB/NJ	no annotation
JF1/MsJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225021512	miRNA gene	Chr14:106376891-106376988 (+)
PWK/PhJ	ENSLUMG00010001279	miRNA gene	Chr14:97987972-97988067 (+)
SPRET/EiJ	ENSMSPG00010012715	miRNA gene	Chr14:102120882-102120970 (+)
WSB/EiJ	ENSIUOG00005006396	miRNA gene	Chr14:97939515-97939610 (+)

Homology

• Gene Tree
  Gm54473
  

Sequences &
Gene Models

• All Sequences
  13

• Ensembl
  ENSMUSG00002076289 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076289	Ensembl Gene Model | MGI Sequence Detail	96	C57BL/6J
transcript	ENSMUST00020181837	Ensembl | MGI Sequence Detail	96	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;