Gm54472 Gene Detail

Summary

• Symbol
  Gm54472
• Name
  predicted gene, 54472

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845424
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:73115036-73115334 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845424	unclassified non-coding RNA gene	Chr3:73115036-73115334 (-)
129S1/SvImJ	ENSMUSG00200001910	unclassified non-coding RNA gene	Chr3:69866643-69866941 (-)
A/J	ENSMUSG00195027384	unclassified non-coding RNA gene	Chr3:69961368-69961666 (-)
AKR/J	ENSMUSG00220025507	unclassified non-coding RNA gene	Chr3:69963848-69964146 (-)
BALB/cJ	ENSMUSG00180008571	unclassified non-coding RNA gene	Chr3:70041527-70041825 (-)
C3H/HeJ	ENSMUSG00175003714	unclassified non-coding RNA gene	Chr3:69905025-69905323 (-)
C57BL/6NJ	ENSMUSG00215007058	unclassified non-coding RNA gene	Chr3:70336386-70336684 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005022571	unclassified non-coding RNA gene	Chr3:69521185-69521482 (-)
CBA/J	ENSMUSG00210002391	unclassified non-coding RNA gene	Chr3:69986245-69986543 (-)
DBA/2J	ENSMUSG00185015407	unclassified non-coding RNA gene	Chr3:70135335-70135633 (-)
FVB/NJ	ENSMUSG00205009839	unclassified non-coding RNA gene	Chr3:69013128-69013426 (-)
JF1/MsJ	ENSUMUG00000001560	unclassified non-coding RNA gene	Chr3:69721229-69721527 (-)
LP/J	ENSMUSG00230009650	unclassified non-coding RNA gene	Chr3:72146535-72146833 (-)
NOD/ShiLtJ	ENSMUSG00190003354	unclassified non-coding RNA gene	Chr3:70451900-70452198 (-)
NZO/HlLtJ	ENSMUSG00225004916	unclassified non-coding RNA gene	Chr3:74846975-74847273 (-)
PWK/PhJ	ENSLUMG00010015175	unclassified non-coding RNA gene	Chr3:69805221-69805519 (-)
SPRET/EiJ	ENSMSPG00010008449	unclassified non-coding RNA gene	Chr3:70466804-70467101 (-)
WSB/EiJ	ENSIUOG00005016474	unclassified non-coding RNA gene	Chr3:70326279-70326577 (-)

Homology

• Gene Tree
  Gm54472
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075221 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075221	Ensembl Gene Model | MGI Sequence Detail	299	C57BL/6J
transcript	ENSMUST00020182171	Ensembl | MGI Sequence Detail	299	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;