Gm54471 Gene Detail

Summary

• Symbol
  Gm54471
• Name
  predicted gene, 54471

• Feature Type
  miRNA gene
• IDs
  MGI:6845422
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:22226715-22226852 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  160 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845422	miRNA gene	Chr13:22226715-22226852 (+)
129S1/SvImJ	ENSMUSG00200014272	miRNA gene	Chr13:19420449-19420586 (+)
A/J	ENSMUSG00195041584	miRNA gene	Chr13:18568631-18568768 (+)
AKR/J	ENSMUSG00220036227	miRNA gene	Chr13:18477579-18477716 (+)
BALB/cJ	ENSMUSG00180035977	miRNA gene	Chr13:18929905-18930042 (+)
C3H/HeJ	ENSMUSG00175038486	miRNA gene	Chr13:19035055-19035192 (+)
C57BL/6NJ	ENSMUSG00215035853	miRNA gene	Chr13:18983144-18983281 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014947	miRNA gene	Chr13:19057941-19058078 (+)
CBA/J	ENSMUSG00210032000	miRNA gene	Chr13:18896608-18896745 (+)
DBA/2J	ENSMUSG00185014746	miRNA gene	Chr13:19590964-19591101 (+)
FVB/NJ	ENSMUSG00205052838	miRNA gene	Chr13:18740505-18740642 (+)
JF1/MsJ	ENSUMUG00000022123	miRNA gene	Chr13:19286914-19287051 (+)
LP/J	ENSMUSG00230036184	miRNA gene	Chr13:28981670-28981807 (+)
NOD/ShiLtJ	ENSMUSG00190024149	miRNA gene	Chr13:18849811-18849948 (+)
NZO/HlLtJ	ENSMUSG00225046776	miRNA gene	Chr13:22747281-22747418 (+)
PWK/PhJ	ENSLUMG00010031051	miRNA gene	Chr13:18285754-18285891 (+)
SPRET/EiJ	ENSMSPG00010021469	miRNA gene	Chr13:18024799-18024936 (+)
WSB/EiJ	ENSIUOG00005036071	miRNA gene	Chr13:18218268-18218405 (+)

Homology

• Gene Tree
  Gm54471
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075113 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075113	Ensembl Gene Model | MGI Sequence Detail	138	C57BL/6J
transcript	ENSMUST00020182459	Ensembl | MGI Sequence Detail	138	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;