Gm54470 Gene Detail

Summary

• Symbol
  Gm54470
• Name
  predicted gene, 54470

• Feature Type
  miRNA gene
• IDs
  MGI:6845420
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:73054182-73054291 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  103 from dbSNP Build 142
• Strain Annotations
  29

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845420	miRNA gene	Chr3:73054182-73054291 (+)
129S1/SvImJ	ENSMUSG00200043248	miRNA gene	Chr7:6628384-6628491 (+)
129S1/SvImJ	ENSMUSG00200001932	miRNA gene	Chr3:69805606-69805715 (+)
A/J	ENSMUSG00195048290	miRNA gene	Chr4:109360270-109360379 (-)
A/J	ENSMUSG00195027394	miRNA gene	Chr3:69900281-69900390 (+)
A/J	ENSMUSG00195048284	miRNA gene	Chr4:108488807-108488916 (-)
AKR/J	ENSMUSG00220025531	miRNA gene	Chr3:69902787-69902896 (+)
AKR/J	ENSMUSG00220047344	miRNA gene	Chr6:65837320-65837429 (-)
AKR/J	ENSMUSG00220012911	miRNA gene	Chr4:108617512-108617621 (-)
BALB/cJ	ENSMUSG00180008592	miRNA gene	Chr3:69980485-69980594 (+)
C3H/HeJ	ENSMUSG00175003723	miRNA gene	Chr3:69843971-69844080 (+)
C57BL/6NJ	ENSMUSG00215007088	miRNA gene	Chr3:70275330-70275439 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023190	miRNA gene	Chr4:108159775-108159881 (-)
CAST/EiJ	ENSTCUG00005022604	miRNA gene	Chr3:69460877-69460986 (+)
CBA/J	ENSMUSG00210053542	miRNA gene	Chr4:107996029-107996138 (-)
CBA/J	ENSMUSG00210002399	miRNA gene	Chr3:69925196-69925305 (+)
CBA/J	ENSMUSG00210049775	miRNA gene	Chr7:5951517-5951624 (+)
DBA/2J	ENSMUSG00185054947	miRNA gene	Chr7:26036832-26036941 (+)
DBA/2J	ENSMUSG00185015424	miRNA gene	Chr3:70074285-70074394 (+)
FVB/NJ	ENSMUSG00205009854	miRNA gene	Chr3:68952087-68952196 (+)
JF1/MsJ	ENSUMUG00000001588	miRNA gene	Chr3:69653243-69653352 (+)
LP/J	ENSMUSG00230009524	miRNA gene	Chr3:72085500-72085609 (+)
NOD/ShiLtJ	ENSMUSG00190003350	miRNA gene	Chr3:70389925-70390034 (+)
NZO/HlLtJ	ENSMUSG00225004675	miRNA gene	Chr3:74785935-74786044 (+)
PWK/PhJ	ENSLUMG00010015181	miRNA gene	Chr3:69724718-69724827 (+)
SPRET/EiJ	ENSMSPG00010008457	miRNA gene	Chr3:70395255-70395364 (+)
WSB/EiJ	ENSIUOG00005045804	miRNA gene	Chr4:107684984-107685093 (-)
WSB/EiJ	ENSIUOG00005008793	miRNA gene	Chr4:14895079-14895188 (+)
WSB/EiJ	ENSIUOG00005016484	miRNA gene	Chr3:70265250-70265359 (+)

Homology

• Gene Tree
  Gm54470
  

Sequences &
Gene Models

• All Sequences
  31

• Ensembl
  ENSMUSG00002075319 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075319	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020182353	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;