Gm54464 Gene Detail

Summary

• Symbol
  Gm54464
• Name
  predicted gene, 54464

• Feature Type
  miRNA gene
• IDs
  MGI:6845408
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:22219334-22219477 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  149 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845408	miRNA gene	Chr13:22219334-22219477 (+)
129S1/SvImJ	ENSMUSG00200014753	miRNA gene	Chr13:19413065-19413208 (+)
A/J	ENSMUSG00195042580	miRNA gene	Chr13:18561247-18561390 (+)
AKR/J	ENSMUSG00220033773	miRNA gene	Chr13:18470198-18470341 (+)
BALB/cJ	ENSMUSG00180037619	miRNA gene	Chr13:18922521-18922664 (+)
C3H/HeJ	ENSMUSG00175036951	miRNA gene	Chr13:19027671-19027814 (+)
C57BL/6NJ	ENSMUSG00215036108	miRNA gene	Chr13:18975762-18975905 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014260	miRNA gene	Chr13:19050543-19050686 (+)
CBA/J	ENSMUSG00210032203	miRNA gene	Chr13:18889224-18889367 (+)
DBA/2J	ENSMUSG00185014496	miRNA gene	Chr13:19583580-19583723 (+)
FVB/NJ	ENSMUSG00205051599	miRNA gene	Chr13:18733121-18733264 (+)
JF1/MsJ	ENSUMUG00000023403	miRNA gene	Chr13:19279511-19279654 (+)
LP/J	ENSMUSG00230035748	miRNA gene	Chr13:28974266-28974409 (+)
NOD/ShiLtJ	ENSMUSG00190022662	miRNA gene	Chr13:18842427-18842570 (+)
NZO/HlLtJ	ENSMUSG00225046449	miRNA gene	Chr13:22739900-22740043 (+)
PWK/PhJ	ENSLUMG00010034820	miRNA gene	Chr13:18058468-18058606 (-)
PWK/PhJ	ENSLUMG00010031928	miRNA gene	Chr13:18278383-18278526 (+)
SPRET/EiJ	ENSMSPG00010019993	miRNA gene	Chr13:18017402-18017545 (+)
WSB/EiJ	ENSIUOG00005035759	miRNA gene	Chr13:18210883-18211026 (+)

Homology

• Gene Tree
  Gm54464
  

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00002076329 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076329	Ensembl Gene Model | MGI Sequence Detail	144	C57BL/6J
transcript	ENSMUST00020182475	Ensembl | MGI Sequence Detail	144	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;