Gm54462 Gene Detail

Summary

• Symbol
  Gm54462
• Name
  predicted gene, 54462

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845404
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:86856731-86857032 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  124 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845404	unclassified non-coding RNA gene	Chr12:86856731-86857032 (+)
129S1/SvImJ	ENSMUSG00200051539	unclassified non-coding RNA gene	Chr12:78872295-78872596 (+)
A/J	ENSMUSG00195035119	unclassified non-coding RNA gene	Chr12:81491975-81492276 (+)
AKR/J	ENSMUSG00220049229	unclassified non-coding RNA gene	Chr12:79287885-79288186 (+)
BALB/cJ	ENSMUSG00180027116	unclassified non-coding RNA gene	Chr12:80529732-80530033 (+)
C3H/HeJ	ENSMUSG00175040978	unclassified non-coding RNA gene	Chr12:83622687-83622988 (+)
C57BL/6NJ	ENSMUSG00215047240	unclassified non-coding RNA gene	Chr12:79836146-79836447 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033799	unclassified non-coding RNA gene	Chr12:79807602-79807903 (+)
CBA/J	ENSMUSG00210046640	unclassified non-coding RNA gene	Chr12:80041156-80041457 (+)
DBA/2J	ENSMUSG00185002717	unclassified non-coding RNA gene	Chr12:81893038-81893339 (+)
FVB/NJ	ENSMUSG00205041596	unclassified non-coding RNA gene	Chr12:79707700-79708001 (+)
JF1/MsJ	ENSUMUG00000052398	unclassified non-coding RNA gene	Chr12:85901964-85902265 (+)
LP/J	ENSMUSG00230045908	unclassified non-coding RNA gene	Chr12:88955216-88955517 (+)
NOD/ShiLtJ	ENSMUSG00190047723	unclassified non-coding RNA gene	Chr12:79100518-79100819 (+)
NZO/HlLtJ	ENSMUSG00225052811	unclassified non-coding RNA gene	Chr12:90992237-90992538 (+)
PWK/PhJ	ENSLUMG00010031776	unclassified non-coding RNA gene	Chr12:79912434-79912735 (+)
SPRET/EiJ	ENSMSPG00010001130	unclassified non-coding RNA gene	Chr12:81724227-81724528 (+)
WSB/EiJ	ENSIUOG00005044671	unclassified non-coding RNA gene	Chr12:79760552-79760853 (+)

Homology

• Gene Tree
  Gm54462
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075409 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075409	Ensembl Gene Model | MGI Sequence Detail	302	C57BL/6J
transcript	ENSMUST00020181963	Ensembl | MGI Sequence Detail	302	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;