Gm54458 Gene Detail

Summary

• Symbol
  Gm54458
• Name
  predicted gene, 54458

• Feature Type
  miRNA gene
• IDs
  MGI:6845396
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:39065178-39065248 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  80 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845396	miRNA gene	ChrX:39065178-39065248 (-)
129S1/SvImJ	ENSMUSG00200022078	miRNA gene	ChrX:23002812-23002882 (-)
A/J	ENSMUSG00195025385	miRNA gene	ChrX:25657638-25657708 (-)
AKR/J	ENSMUSG00220025272	miRNA gene	ChrX:22676711-22676781 (-)
BALB/cJ	ENSMUSG00180012971	miRNA gene	ChrX:23433078-23433148 (-)
C3H/HeJ	ENSMUSG00175024594	miRNA gene	ChrX:26408506-26408576 (-)
C57BL/6NJ	ENSMUSG00215025693	miRNA gene	ChrX:23411450-23411520 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034816	miRNA gene	ChrX:25542738-25542808 (-)
CBA/J	ENSMUSG00210035543	miRNA gene	ChrX:23708051-23708121 (-)
DBA/2J	ENSMUSG00185024676	miRNA gene	ChrX:34420830-34420900 (-)
FVB/NJ	ENSMUSG00205008026	miRNA gene	ChrX:22351890-22351960 (-)
JF1/MsJ	ENSUMUG00000031679	miRNA gene	ChrX:53495901-53495971 (-)
LP/J	ENSMUSG00230020071	miRNA gene	ChrX:40920186-40920256 (-)
NOD/ShiLtJ	ENSMUSG00190022812	miRNA gene	ChrX:22889480-22889550 (-)
NZO/HlLtJ	ENSMUSG00225039915	miRNA gene	ChrX:46119839-46119909 (-)
PWK/PhJ	ENSLUMG00010038220	miRNA gene	ChrX:23223984-23224054 (-)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm54458
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002076364 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076364	Ensembl Gene Model | MGI Sequence Detail	71	C57BL/6J
transcript	ENSMUST00020182987	Ensembl | MGI Sequence Detail	71	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;