Gm54455 Gene Detail

Summary

• Symbol
  Gm54455
• Name
  predicted gene, 54455

• Feature Type
  rRNA gene
• IDs
  MGI:6845390
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:34642790-34642906 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  62 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845390	rRNA gene	Chr18:34642790-34642906 (+)
129S1/SvImJ	ENSMUSG00200044270	rRNA gene	Chr18:31643258-31643374 (+)
A/J	ENSMUSG00195038332	rRNA gene	Chr18:31805755-31805871 (+)
AKR/J	ENSMUSG00220017453	rRNA gene	Chr18:31784038-31784154 (+)
BALB/cJ	ENSMUSG00180022142	rRNA gene	Chr18:32255438-32255554 (+)
C3H/HeJ	ENSMUSG00175043245	rRNA gene	Chr18:31756448-31756564 (+)
C57BL/6NJ	ENSMUSG00215029406	rRNA gene	Chr18:31511189-31511305 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025172	rRNA gene	Chr18:31405067-31405183 (+)
CBA/J	ENSMUSG00210021907	rRNA gene	Chr18:31797605-31797721 (+)
DBA/2J	ENSMUSG00185021025	rRNA gene	Chr18:31732197-31732313 (+)
FVB/NJ	ENSMUSG00205038527	rRNA gene	Chr18:31451100-31451216 (+)
JF1/MsJ	ENSUMUG00000045895	rRNA gene	Chr18:31872223-31872339 (+)
LP/J	ENSMUSG00230049367	rRNA gene	Chr18:33840080-33840196 (+)
NOD/ShiLtJ	ENSMUSG00190024253	rRNA gene	Chr18:31510219-31510335 (+)
NZO/HlLtJ	ENSMUSG00225046913	rRNA gene	Chr18:33742811-33742927 (+)
PWK/PhJ	ENSLUMG00010013150	rRNA gene	Chr18:32017729-32017845 (+)
SPRET/EiJ	ENSMSPG00010023829	rRNA gene	Chr18:32074845-32074961 (+)
WSB/EiJ	ENSIUOG00005008496	rRNA gene	Chr18:31511183-31511299 (+)

Homology

• Gene Tree
  Gm54455
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076603 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076603	Ensembl Gene Model | MGI Sequence Detail	117	C57BL/6J
transcript	ENSMUST00020183254	Ensembl | MGI Sequence Detail	117	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;