Gm54454 Gene Detail

Summary

• Symbol
  Gm54454
• Name
  predicted gene, 54454

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845388
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:86697944-86698028 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  182 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845388	unclassified non-coding RNA gene	Chr12:86697944-86698028 (+)
129S1/SvImJ	ENSMUSG00200051546	unclassified non-coding RNA gene	Chr12:78713291-78713375 (+)
A/J	ENSMUSG00195035141	unclassified non-coding RNA gene	Chr12:81332950-81333034 (+)
AKR/J	ENSMUSG00220049236	unclassified non-coding RNA gene	Chr12:79128854-79128938 (+)
BALB/cJ	ENSMUSG00180027150	unclassified non-coding RNA gene	Chr12:80370692-80370776 (+)
C3H/HeJ	ENSMUSG00175041003	unclassified non-coding RNA gene	Chr12:83463674-83463758 (+)
C57BL/6NJ	ENSMUSG00215047252	unclassified non-coding RNA gene	Chr12:79677117-79677201 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033808	unclassified non-coding RNA gene	Chr12:79646716-79646800 (+)
CBA/J	ENSMUSG00210046654	unclassified non-coding RNA gene	Chr12:79882153-79882237 (+)
DBA/2J	ENSMUSG00185002725	unclassified non-coding RNA gene	Chr12:81734042-81734126 (+)
FVB/NJ	ENSMUSG00205041630	unclassified non-coding RNA gene	Chr12:79545009-79545093 (+)
JF1/MsJ	ENSUMUG00000052418	unclassified non-coding RNA gene	Chr12:85740893-85741004 (+)
LP/J	ENSMUSG00230045938	unclassified non-coding RNA gene	Chr12:88796248-88796332 (+)
NOD/ShiLtJ	ENSMUSG00190047740	unclassified non-coding RNA gene	Chr12:78941807-78941891 (+)
NZO/HlLtJ	ENSMUSG00225052845	unclassified non-coding RNA gene	Chr12:90833241-90833325 (+)
PWK/PhJ	ENSLUMG00010031789	unclassified non-coding RNA gene	Chr12:79752802-79752886 (+)
SPRET/EiJ	ENSMSPG00010001131	unclassified non-coding RNA gene	Chr12:81561982-81562066 (+)
WSB/EiJ	ENSIUOG00005044686	unclassified non-coding RNA gene	Chr12:79598567-79598651 (+)

Homology

• Gene Tree
  Gm54454
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076092 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076092	Ensembl Gene Model | MGI Sequence Detail	85	C57BL/6J
transcript	ENSMUST00020181758	Ensembl | MGI Sequence Detail	85	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;