Gm54452 Gene Detail

Summary

• Symbol
  Gm54452
• Name
  predicted gene, 54452

• Feature Type
  miRNA gene
• IDs
  MGI:6845384
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:22017263-22017400 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  34 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845384	miRNA gene	Chr13:22017263-22017400 (+)
129S1/SvImJ	ENSMUSG00200014356	miRNA gene	Chr13:19200589-19200726 (+)
A/J	ENSMUSG00195039377	miRNA gene	Chr13:18352696-18352833 (+)
AKR/J	ENSMUSG00220032198	miRNA gene	Chr13:18268064-18268201 (+)
BALB/cJ	ENSMUSG00180038397	miRNA gene	Chr13:18713979-18714116 (+)
C3H/HeJ	ENSMUSG00175035909	miRNA gene	Chr13:18819130-18819267 (+)
C57BL/6NJ	ENSMUSG00215037316	miRNA gene	Chr13:18773648-18773785 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014571	miRNA gene	Chr13:18840190-18840327 (+)
CBA/J	ENSMUSG00210031280	miRNA gene	Chr13:18680676-18680813 (+)
DBA/2J	ENSMUSG00185014061	miRNA gene	Chr13:19375040-19375177 (+)
FVB/NJ	ENSMUSG00205052081	miRNA gene	Chr13:18524543-18524680 (+)
JF1/MsJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190022508	miRNA gene	Chr13:18633859-18633996 (+)
NZO/HlLtJ	ENSMUSG00225046721	miRNA gene	Chr13:22537796-22537933 (+)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010021077	miRNA gene	Chr13:17809141-17809278 (+)
WSB/EiJ	ENSIUOG00005036331	miRNA gene	Chr13:18008798-18008935 (+)

Homology

• Gene Tree
  Gm54452
  

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00002076367 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076367	Ensembl Gene Model | MGI Sequence Detail	138	C57BL/6J
transcript	ENSMUST00020181926	Ensembl | MGI Sequence Detail	138	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;