Gm54450 Gene Detail

Summary

• Symbol
  Gm54450
• Name
  predicted gene, 54450

• Feature Type
  miRNA gene
• IDs
  MGI:6845380
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:21994882-21995019 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  8 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845380	miRNA gene	Chr13:21994882-21995019 (-)
129S1/SvImJ	ENSMUSG00200014363	miRNA gene	Chr13:19185816-19185953 (-)
A/J	ENSMUSG00195039392	miRNA gene	Chr13:18330314-18330451 (-)
AKR/J	ENSMUSG00220032222	miRNA gene	Chr13:18245683-18245820 (-)
BALB/cJ	ENSMUSG00180038415	miRNA gene	Chr13:18691597-18691734 (-)
C3H/HeJ	ENSMUSG00175035924	miRNA gene	Chr13:18796750-18796887 (-)
C57BL/6NJ	ENSMUSG00215037346	miRNA gene	Chr13:18751265-18751402 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014574	miRNA gene	Chr13:18822977-18823114 (-)
CBA/J	ENSMUSG00210031283	miRNA gene	Chr13:18658295-18658432 (-)
DBA/2J	ENSMUSG00185014068	miRNA gene	Chr13:19352660-19352797 (-)
FVB/NJ	ENSMUSG00205052085	miRNA gene	Chr13:18502161-18502298 (-)
JF1/MsJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190022528	miRNA gene	Chr13:18611479-18611616 (-)
NZO/HlLtJ	ENSMUSG00225046567	miRNA gene	Chr13:22515414-22515551 (-)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010021089	miRNA gene	Chr13:17788018-17788155 (-)
WSB/EiJ	ENSIUOG00005036350	miRNA gene	Chr13:17986417-17986554 (-)

Homology

• Gene Tree
  Gm54450
  

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00002075597 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075597	Ensembl Gene Model | MGI Sequence Detail	138	C57BL/6J
transcript	ENSMUST00020183511	Ensembl | MGI Sequence Detail	138	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;