Gm54448 Gene Detail

Summary

• Symbol
  Gm54448
• Name
  predicted gene, 54448

• Feature Type
  miRNA gene
• IDs
  MGI:6845376
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:42778470-42778560 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  97 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845376	miRNA gene	Chr13:42778470-42778560 (+)
129S1/SvImJ	ENSMUSG00200013752	miRNA gene	Chr13:40052078-40052167 (+)
A/J	ENSMUSG00195034993	miRNA gene	Chr13:39111998-39112088 (+)
AKR/J	ENSMUSG00220034888	miRNA gene	Chr13:38899979-38900071 (+)
BALB/cJ	ENSMUSG00180008396	miRNA gene	Chr13:39418395-39418484 (+)
C3H/HeJ	ENSMUSG00175013883	miRNA gene	Chr13:39383220-39383309 (+)
C57BL/6NJ	ENSMUSG00215013825	miRNA gene	Chr13:39520778-39520868 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005036232	miRNA gene	Chr13:39427005-39427601 (-)
CBA/J	ENSMUSG00210011955	miRNA gene	Chr13:39388807-39388896 (+)
DBA/2J	ENSMUSG00185034318	miRNA gene	Chr13:40183243-40183332 (+)
FVB/NJ	ENSMUSG00205035422	miRNA gene	Chr13:39138184-39138273 (+)
JF1/MsJ	ENSUMUG00000039995	miRNA gene	Chr13:39724446-39724538 (+)
LP/J	ENSMUSG00230018092	miRNA gene	Chr13:49520958-49521047 (+)
NOD/ShiLtJ	ENSMUSG00190013492	miRNA gene	Chr13:39582413-39582502 (+)
NZO/HlLtJ	ENSMUSG00225036928	miRNA gene	Chr13:43290066-43290155 (+)
PWK/PhJ	ENSLUMG00010029690	miRNA gene	Chr13:38574470-38574555 (+)
SPRET/EiJ	ENSMSPG00010011295	miRNA gene	Chr13:38641737-38642280 (-)
WSB/EiJ	ENSIUOG00005029089	miRNA gene	Chr13:38727726-38727816 (+)

Homology

• Gene Tree
  Gm54448
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076214 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076214	Ensembl Gene Model | MGI Sequence Detail	91	C57BL/6J
transcript	ENSMUST00020182430	Ensembl | MGI Sequence Detail	91	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;