Gm54447 Gene Detail

Summary

• Symbol
  Gm54447
• Name
  predicted gene, 54447

• Feature Type
  rRNA gene
• IDs
  MGI:6845374
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:63642966-63643085 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  167 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845374	rRNA gene	Chr18:63642966-63643085 (+)
129S1/SvImJ	ENSMUSG00200025560	rRNA gene	Chr18:60823815-60823934 (+)
A/J	ENSMUSG00195034344	rRNA gene	Chr18:60882664-60882783 (+)
AKR/J	ENSMUSG00220022831	rRNA gene	Chr18:60852717-60852836 (+)
BALB/cJ	ENSMUSG00180012617	rRNA gene	Chr18:61449629-61449748 (+)
C3H/HeJ	ENSMUSG00175010801	rRNA gene	Chr18:61054090-61054209 (+)
C57BL/6NJ	ENSMUSG00215039983	rRNA gene	Chr18:60381610-60381729 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005028281	rRNA gene	Chr18:60036479-60036599 (+)
CBA/J	ENSMUSG00210031316	rRNA gene	Chr18:61012133-61012252 (+)
DBA/2J	ENSMUSG00185029750	rRNA gene	Chr18:60909058-60909177 (+)
FVB/NJ	ENSMUSG00205018841	rRNA gene	Chr18:60385435-60385554 (+)
JF1/MsJ	ENSUMUG00000042111	rRNA gene	Chr18:60785990-60786109 (+)
LP/J	ENSMUSG00230039735	rRNA gene	Chr18:62970407-62970526 (+)
NOD/ShiLtJ	ENSMUSG00190008554	rRNA gene	Chr18:60651783-60651902 (+)
NZO/HlLtJ	ENSMUSG00225030671	rRNA gene	Chr18:62848081-62848200 (+)
PWK/PhJ	ENSLUMG00010027541	rRNA gene	Chr18:61199643-61199762 (+)
SPRET/EiJ	ENSMSPG00010038386	rRNA gene	Chr18:61420297-61420417 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm54447
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002076873 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076873	Ensembl Gene Model | MGI Sequence Detail	120	C57BL/6J
transcript	ENSMUST00020181985	Ensembl | MGI Sequence Detail	120	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;