Gm54446 Gene Detail

Summary

• Symbol
  Gm54446
• Name
  predicted gene, 54446

• Feature Type
  snRNA gene
• IDs
  MGI:6845372
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:41731385-41731550 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  72 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845372	snRNA gene	Chr13:41731385-41731550 (-)
129S1/SvImJ	ENSMUSG00200012932	snRNA gene	Chr13:39004575-39004740 (-)
A/J	ENSMUSG00195035904	snRNA gene	Chr13:38064451-38064616 (-)
AKR/J	ENSMUSG00220032839	snRNA gene	Chr13:37851714-37851879 (-)
BALB/cJ	ENSMUSG00180008727	snRNA gene	Chr13:38370934-38371099 (-)
C3H/HeJ	ENSMUSG00175013779	snRNA gene	Chr13:38335793-38335958 (-)
C57BL/6NJ	ENSMUSG00215014425	snRNA gene	Chr13:38472555-38472720 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034745	snRNA gene	Chr13:38370114-38370279 (-)
CBA/J	ENSMUSG00210012063	snRNA gene	Chr13:38341464-38341629 (-)
DBA/2J	ENSMUSG00185034019	snRNA gene	Chr13:39135812-39135977 (-)
FVB/NJ	ENSMUSG00205030895	snRNA gene	Chr13:38090712-38090877 (-)
JF1/MsJ	ENSUMUG00000038698	snRNA gene	Chr13:38674671-38674836 (-)
LP/J	ENSMUSG00230017823	snRNA gene	Chr13:48473614-48473779 (-)
NOD/ShiLtJ	ENSMUSG00190012828	snRNA gene	Chr13:38535073-38535238 (-)
NZO/HlLtJ	ENSMUSG00225036879	snRNA gene	Chr13:42242673-42242838 (-)
PWK/PhJ	ENSLUMG00010030817	snRNA gene	Chr13:37526475-37526640 (-)
SPRET/EiJ	ENSMSPG00010010817	snRNA gene	Chr13:37581394-37581559 (-)
WSB/EiJ	ENSIUOG00005029841	snRNA gene	Chr13:37673248-37673413 (-)

Homology

• Gene Tree
  Gm54446
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076455 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076455	Ensembl Gene Model | MGI Sequence Detail	166	C57BL/6J
transcript	ENSMUST00020181813	Ensembl | MGI Sequence Detail	166	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;