Gm54445 Gene Detail

Summary

• Symbol
  Gm54445
• Name
  predicted gene, 54445

• Feature Type
  rRNA gene
• IDs
  MGI:6845370
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:69592800-69592913 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  140 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845370	rRNA gene	Chr3:69592800-69592913 (+)
129S1/SvImJ	ENSMUSG00200001725	rRNA gene	Chr3:66350334-66350447 (+)
A/J	ENSMUSG00195026885	rRNA gene	Chr3:66458930-66459043 (+)
AKR/J	ENSMUSG00220025374	rRNA gene	Chr3:66451854-66451967 (+)
BALB/cJ	ENSMUSG00180008562	rRNA gene	Chr3:66533495-66533608 (+)
C3H/HeJ	ENSMUSG00175003679	rRNA gene	Chr3:66366456-66366569 (+)
C57BL/6NJ	ENSMUSG00215007407	rRNA gene	Chr3:66808736-66808849 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005022141	rRNA gene	Chr3:65988649-65988762 (+)
CBA/J	ENSMUSG00210002229	rRNA gene	Chr3:66462009-66462122 (+)
DBA/2J	ENSMUSG00185015719	rRNA gene	Chr3:66616973-66617086 (+)
FVB/NJ	ENSMUSG00205009831	rRNA gene	Chr3:65519845-65519958 (+)
JF1/MsJ	ENSUMUG00000001217	rRNA gene	Chr3:66209219-66209332 (+)
LP/J	ENSMUSG00230002312	rRNA gene	Chr3:68637133-68637246 (+)
NOD/ShiLtJ	ENSMUSG00190003184	rRNA gene	Chr3:66921727-66921840 (+)
NZO/HlLtJ	ENSMUSG00225004693	rRNA gene	Chr3:71328514-71328627 (+)
PWK/PhJ	ENSLUMG00010015052	rRNA gene	Chr3:66318816-66318929 (+)
SPRET/EiJ	ENSMSPG00010008380	rRNA gene	Chr3:66826369-66826482 (+)
WSB/EiJ	ENSIUOG00005016650	rRNA gene	Chr3:66822542-66822655 (+)

Homology

• Gene Tree
  Gm54445
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076320 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076320	Ensembl Gene Model | MGI Sequence Detail	114	C57BL/6J
transcript	ENSMUST00020183462	Ensembl | MGI Sequence Detail	114	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;