Gm54444 Gene Detail

Summary

• Symbol
  Gm54444
• Name
  predicted gene, 54444

• Feature Type
  snoRNA gene
• IDs
  MGI:6845368
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:5485928-5485993 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  74 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845368	snoRNA gene	Chr19:5485928-5485993 (+)
129S1/SvImJ	ENSMUSG00200052614	snoRNA gene	Chr19:2247844-2247909 (+)
A/J	ENSMUSG00195054110	snoRNA gene	Chr19:2643357-2643423 (+)
AKR/J	ENSMUSG00220050142	snoRNA gene	Chr19:2416476-2416542 (+)
BALB/cJ	ENSMUSG00180051623	snoRNA gene	Chr19:3018074-3018140 (+)
C3H/HeJ	ENSMUSG00175015114	snoRNA gene	Chr19:2268292-2268358 (+)
C57BL/6NJ	ENSMUSG00215047001	snoRNA gene	Chr19:2486045-2486110 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005044495	snoRNA gene	Chr19:2408025-2408091 (+)
CBA/J	ENSMUSG00210050814	snoRNA gene	Chr19:2269414-2269479 (+)
DBA/2J	ENSMUSG00185052854	snoRNA gene	Chr19:2645876-2645941 (+)
FVB/NJ	ENSMUSG00205052393	snoRNA gene	Chr19:2654104-2654169 (+)
JF1/MsJ	ENSUMUG00000056505	snoRNA gene	Chr19:2624858-2624924 (+)
LP/J	ENSMUSG00230054304	snoRNA gene	Chr19:3554759-3554824 (+)
NOD/ShiLtJ	ENSMUSG00190052077	snoRNA gene	Chr19:2177876-2177942 (+)
NZO/HlLtJ	ENSMUSG00225026839	snoRNA gene	Chr19:7263534-7263599 (+)
PWK/PhJ	ENSLUMG00010008219	snoRNA gene	Chr19:2393512-2393577 (+)
SPRET/EiJ	ENSMSPG00010050339	snoRNA gene	Chr19:2383237-2383289 (+)
WSB/EiJ	ENSIUOG00005051719	snoRNA gene	Chr19:2285946-2286011 (+)

Homology

• Gene Tree
  Gm54444
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076078 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076078	Ensembl Gene Model | MGI Sequence Detail	66	C57BL/6J
transcript	ENSMUST00020182778	Ensembl | MGI Sequence Detail	66	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;