Gm54442 Gene Detail

Summary

• Symbol
  Gm54442
• Name
  predicted gene, 54442

• Feature Type
  snRNA gene
• IDs
  MGI:6845364
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:33137716-33137819 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  150 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845364	snRNA gene	Chr18:33137716-33137819 (-)
129S1/SvImJ	ENSMUSG00200016450	snRNA gene	Chr18:30137659-30137762 (-)
A/J	ENSMUSG00195002507	snRNA gene	Chr18:30323751-30323854 (-)
AKR/J	ENSMUSG00220011807	snRNA gene	Chr18:30286822-30286925 (-)
BALB/cJ	ENSMUSG00180021118	snRNA gene	Chr18:30779892-30779995 (-)
C3H/HeJ	ENSMUSG00175024155	snRNA gene	Chr18:30294709-30294812 (-)
C57BL/6NJ	ENSMUSG00215022669	snRNA gene	Chr18:30009222-30009325 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016445	snRNA gene	Chr18:29934782-29934885 (-)
CBA/J	ENSMUSG00210016256	snRNA gene	Chr18:30322639-30322742 (-)
DBA/2J	ENSMUSG00185023288	snRNA gene	Chr18:30257211-30257314 (-)
FVB/NJ	ENSMUSG00205023137	snRNA gene	Chr18:30000001-30000104 (-)
JF1/MsJ	ENSUMUG00000029814	snRNA gene	Chr18:30388431-30388534 (-)
LP/J	ENSMUSG00230048938	snRNA gene	Chr18:32335215-32335318 (-)
NOD/ShiLtJ	ENSMUSG00190007143	snRNA gene	Chr18:30045378-30045481 (-)
NZO/HlLtJ	ENSMUSG00225047623	snRNA gene	Chr18:32246968-32247071 (-)
PWK/PhJ	ENSLUMG00010003776	snRNA gene	Chr18:30542292-30542395 (-)
SPRET/EiJ	ENSMSPG00010023236	snRNA gene	Chr18:30580477-30580580 (-)
WSB/EiJ	ENSIUOG00005002833	snRNA gene	Chr18:30038848-30038951 (-)

Homology

• Gene Tree
  Gm54442
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075498 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075498	Ensembl Gene Model | MGI Sequence Detail	104	C57BL/6J
transcript	ENSMUST00020181947	Ensembl | MGI Sequence Detail	104	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;