Gm54439 Gene Detail

Summary

• Symbol
  Gm54439
• Name
  predicted gene, 54439

• Feature Type
  miRNA gene
• IDs
  MGI:6845358
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:5251226-5251331 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845358	miRNA gene	Chr19:5251226-5251331 (-)
129S1/SvImJ	ENSMUSG00200053268	miRNA gene	Chr19:2011596-2011701 (-)
A/J	ENSMUSG00195054084	miRNA gene	Chr19:2407304-2407409 (-)
AKR/J	ENSMUSG00220051527	miRNA gene	Chr19:2180400-2180505 (-)
BALB/cJ	ENSMUSG00180051447	miRNA gene	Chr19:2782017-2782122 (-)
C3H/HeJ	ENSMUSG00175014925	miRNA gene	Chr19:2026732-2026837 (-)
C57BL/6NJ	ENSMUSG00215047259	miRNA gene	Chr19:2249782-2249887 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005044957	miRNA gene	Chr19:2171316-2171419 (-)
CBA/J	ENSMUSG00210050450	miRNA gene	Chr19:2032238-2032343 (-)
DBA/2J	ENSMUSG00185052545	miRNA gene	Chr19:2408712-2408817 (-)
FVB/NJ	ENSMUSG00205052371	miRNA gene	Chr19:2412162-2412267 (-)
JF1/MsJ	ENSUMUG00000056294	miRNA gene	Chr19:2389393-2389502 (-)
LP/J	ENSMUSG00230054292	miRNA gene	Chr19:3318535-3318640 (-)
NOD/ShiLtJ	ENSMUSG00190053221	miRNA gene	Chr19:1941800-1941905 (-)
NZO/HlLtJ	ENSMUSG00225026806	miRNA gene	Chr19:7027288-7027393 (-)
PWK/PhJ	ENSLUMG00010008914	miRNA gene	Chr19:2162575-2162684 (-)
SPRET/EiJ	ENSMSPG00010051560	miRNA gene	Chr19:2149344-2149449 (-)
WSB/EiJ	ENSIUOG00005050992	miRNA gene	Chr19:2042872-2042977 (-)

Homology

• Gene Tree
  Gm54439
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076406 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076406	Ensembl Gene Model | MGI Sequence Detail	106	C57BL/6J
transcript	ENSMUST00020182438	Ensembl | MGI Sequence Detail	106	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;