Gm54438 Gene Detail

Summary

• Symbol
  Gm54438
• Name
  predicted gene, 54438

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845356
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:32426403-32426710 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  96 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845356	unclassified non-coding RNA gene	Chr18:32426403-32426710 (+)
129S1/SvImJ	ENSMUSG00200016390	unclassified non-coding RNA gene	Chr18:29418025-29418332 (+)
A/J	ENSMUSG00195002505	unclassified non-coding RNA gene	Chr18:29605535-29605842 (+)
AKR/J	ENSMUSG00220011637	unclassified non-coding RNA gene	Chr18:29573639-29573946 (+)
BALB/cJ	ENSMUSG00180003499	unclassified non-coding RNA gene	Chr18:30080964-30081271 (+)
C3H/HeJ	ENSMUSG00175024820	unclassified non-coding RNA gene	Chr18:29596252-29596559 (+)
C57BL/6NJ	ENSMUSG00215022056	unclassified non-coding RNA gene	Chr18:29296957-29297264 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016383	unclassified non-coding RNA gene	Chr18:29227505-29227810 (+)
CBA/J	ENSMUSG00210016286	unclassified non-coding RNA gene	Chr18:29604430-29604737 (+)
DBA/2J	ENSMUSG00185022696	unclassified non-coding RNA gene	Chr18:29538999-29539307 (+)
FVB/NJ	ENSMUSG00205023966	unclassified non-coding RNA gene	Chr18:29283106-29283413 (+)
JF1/MsJ	ENSUMUG00000026956	unclassified non-coding RNA gene	Chr18:29669814-29670119 (+)
LP/J	ENSMUSG00230049059	unclassified non-coding RNA gene	Chr18:31615611-31615918 (+)
NOD/ShiLtJ	ENSMUSG00190007179	unclassified non-coding RNA gene	Chr18:29332996-29333303 (+)
NZO/HlLtJ	ENSMUSG00225047761	unclassified non-coding RNA gene	Chr18:31536547-31536854 (+)
PWK/PhJ	ENSLUMG00010003605	unclassified non-coding RNA gene	Chr18:29834647-29834956 (+)
SPRET/EiJ	ENSMSPG00010022423	unclassified non-coding RNA gene	Chr18:29852550-29852855 (+)
WSB/EiJ	ENSIUOG00005002736	unclassified non-coding RNA gene	Chr18:29344449-29344756 (+)

Homology

• Gene Tree
  Gm54438
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075437 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075437	Ensembl Gene Model | MGI Sequence Detail	308	C57BL/6J
transcript	ENSMUST00020182280	Ensembl | MGI Sequence Detail	308	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;