Gm54436 Gene Detail

Summary

• Symbol
  Gm54436
• Name
  predicted gene, 54436

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845352
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:108158831-108159122 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  105 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845352	unclassified non-coding RNA gene	ChrX:108158831-108159122 (-)
129S1/SvImJ	ENSMUSG00200039500	unclassified non-coding RNA gene	ChrX:89972019-89972310 (-)
A/J	ENSMUSG00195026411	unclassified non-coding RNA gene	ChrX:93679769-93680060 (-)
AKR/J	ENSMUSG00220039293	unclassified non-coding RNA gene	ChrX:88410974-88411265 (-)
BALB/cJ	ENSMUSG00180043032	unclassified non-coding RNA gene	ChrX:90345732-90346023 (-)
C3H/HeJ	ENSMUSG00175028167	unclassified non-coding RNA gene	ChrX:93926378-93926669 (-)
C57BL/6NJ	ENSMUSG00215047496	unclassified non-coding RNA gene	ChrX:90568465-90568756 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020934	unclassified non-coding RNA gene	ChrX:91358310-91358602 (-)
CBA/J	ENSMUSG00210022291	unclassified non-coding RNA gene	ChrX:90825132-90825423 (-)
DBA/2J	ENSMUSG00185029846	unclassified non-coding RNA gene	ChrX:103294254-103294545 (-)
FVB/NJ	ENSMUSG00205040792	unclassified non-coding RNA gene	ChrX:89921622-89921913 (-)
JF1/MsJ	ENSUMUG00000016865	unclassified non-coding RNA gene	ChrX:123880882-123881173 (-)
LP/J	ENSMUSG00230043686	unclassified non-coding RNA gene	ChrX:109939025-109939316 (-)
NOD/ShiLtJ	ENSMUSG00190042414	unclassified non-coding RNA gene	ChrX:90041244-90041535 (-)
NZO/HlLtJ	ENSMUSG00225040669	unclassified non-coding RNA gene	ChrX:115093282-115093573 (-)
PWK/PhJ	ENSLUMG00010041183	unclassified non-coding RNA gene	ChrX:89143965-89144256 (-)
SPRET/EiJ	ENSMSPG00010022078	unclassified non-coding RNA gene	ChrX:93466284-93466572 (-)
WSB/EiJ	ENSIUOG00005043734	unclassified non-coding RNA gene	ChrX:90441934-90442225 (-)

Homology

• Gene Tree
  Gm54436
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074862 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074862	Ensembl Gene Model | MGI Sequence Detail	292	C57BL/6J
transcript	ENSMUST00020182986	Ensembl | MGI Sequence Detail	292	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;