Gm54435 Gene Detail

Summary

• Symbol
  Gm54435
• Name
  predicted gene, 54435

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845350
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:56313705-56313989 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  128 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845350	unclassified non-coding RNA gene	Chr12:56313705-56313989 (-)
129S1/SvImJ	ENSMUSG00200030751	unclassified non-coding RNA gene	Chr12:48223390-48223674 (-)
A/J	ENSMUSG00195001687	unclassified non-coding RNA gene	Chr12:50790253-50790537 (-)
AKR/J	ENSMUSG00220027943	unclassified non-coding RNA gene	Chr12:48808661-48808945 (-)
BALB/cJ	ENSMUSG00180006022	unclassified non-coding RNA gene	Chr12:49811149-49811433 (-)
C3H/HeJ	ENSMUSG00175017030	unclassified non-coding RNA gene	Chr12:52852247-52852531 (-)
C57BL/6NJ	ENSMUSG00215020942	unclassified non-coding RNA gene	Chr12:49157690-49157974 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009056	unclassified non-coding RNA gene	Chr12:49249187-49249471 (-)
CBA/J	ENSMUSG00210009911	unclassified non-coding RNA gene	Chr12:49326475-49326759 (-)
DBA/2J	ENSMUSG00185001466	unclassified non-coding RNA gene	Chr12:51271871-51272155 (-)
FVB/NJ	ENSMUSG00205013995	unclassified non-coding RNA gene	Chr12:49117662-49117946 (-)
JF1/MsJ	ENSUMUG00000008403	unclassified non-coding RNA gene	Chr12:55357534-55357818 (-)
LP/J	ENSMUSG00230015959	unclassified non-coding RNA gene	Chr12:58300287-58300571 (-)
NOD/ShiLtJ	ENSMUSG00190016861	unclassified non-coding RNA gene	Chr12:48320307-48320591 (-)
NZO/HlLtJ	ENSMUSG00225041105	unclassified non-coding RNA gene	Chr12:60443273-60443556 (-)
PWK/PhJ	ENSLUMG00010016717	unclassified non-coding RNA gene	Chr12:49404208-49404492 (-)
SPRET/EiJ	ENSMSPG00010016683	unclassified non-coding RNA gene	Chr12:50883081-50883364 (-)
WSB/EiJ	ENSIUOG00005003659	unclassified non-coding RNA gene	Chr12:49164756-49165040 (-)

Homology

• Gene Tree
  Gm54435
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076840 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076840	Ensembl Gene Model | MGI Sequence Detail	285	C57BL/6J
transcript	ENSMUST00020182439	Ensembl | MGI Sequence Detail	285	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;