Gm54434 Gene Detail

Summary

• Symbol
  Gm54434
• Name
  predicted gene, 54434

• Feature Type
  rRNA gene
• IDs
  MGI:6845348
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:56103421-56103540 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  92 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845348	rRNA gene	Chr12:56103421-56103540 (-)
129S1/SvImJ	ENSMUSG00200030763	rRNA gene	Chr12:48013056-48013175 (-)
A/J	ENSMUSG00195018314	rRNA gene	Chr12:50579882-50580001 (-)
AKR/J	ENSMUSG00220027960	rRNA gene	Chr12:48598283-48598402 (-)
BALB/cJ	ENSMUSG00180006024	rRNA gene	Chr12:49600796-49600915 (-)
C3H/HeJ	ENSMUSG00175017040	rRNA gene	Chr12:52641892-52642011 (-)
C57BL/6NJ	ENSMUSG00215020983	rRNA gene	Chr12:48947313-48947432 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009048	rRNA gene	Chr12:49039599-49039718 (-)
CBA/J	ENSMUSG00210009920	rRNA gene	Chr12:49116131-49116250 (-)
DBA/2J	ENSMUSG00185001469	rRNA gene	Chr12:51061530-51061649 (-)
FVB/NJ	ENSMUSG00205014009	rRNA gene	Chr12:48905628-48905747 (-)
JF1/MsJ	ENSUMUG00000008315	rRNA gene	Chr12:55151895-55152014 (-)
LP/J	ENSMUSG00230015978	rRNA gene	Chr12:58089965-58090084 (-)
NOD/ShiLtJ	ENSMUSG00190016867	rRNA gene	Chr12:48109954-48110073 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010016702	rRNA gene	Chr12:49196603-49196722 (-)
SPRET/EiJ	ENSMSPG00010016688	rRNA gene	Chr12:50641342-50641459 (-)
WSB/EiJ	ENSIUOG00005003661	rRNA gene	Chr12:48954541-48954660 (-)

Homology

• Gene Tree
  Gm54434
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075487 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075487	Ensembl Gene Model | MGI Sequence Detail	120	C57BL/6J
transcript	ENSMUST00020182866	Ensembl | MGI Sequence Detail	120	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;