Gm54430 Gene Detail

Summary

• Symbol
  Gm54430
• Name
  predicted gene, 54430

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845340
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:62047271-62047397 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  109 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845340	unclassified non-coding RNA gene	Chr15:62047271-62047397 (+)
129S1/SvImJ	ENSMUSG00200029515	unclassified non-coding RNA gene	Chr15:59079931-59080057 (+)
A/J	ENSMUSG00195006412	unclassified non-coding RNA gene	Chr15:59108349-59108475 (+)
AKR/J	ENSMUSG00220021289	unclassified non-coding RNA gene	Chr15:59018655-59018781 (+)
BALB/cJ	ENSMUSG00180009633	unclassified non-coding RNA gene	Chr15:59017095-59017221 (+)
C3H/HeJ	ENSMUSG00175004898	unclassified non-coding RNA gene	Chr15:59308464-59308590 (+)
C57BL/6NJ	ENSMUSG00215013787	unclassified non-coding RNA gene	Chr15:59029418-59029544 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007066	unclassified non-coding RNA gene	Chr15:58857364-58857490 (+)
CBA/J	ENSMUSG00210007299	unclassified non-coding RNA gene	Chr15:59140187-59140313 (+)
DBA/2J	ENSMUSG00185027330	unclassified non-coding RNA gene	Chr15:59078092-59078218 (+)
FVB/NJ	ENSMUSG00205006902	unclassified non-coding RNA gene	Chr15:58839439-58839565 (+)
JF1/MsJ	ENSUMUG00000033881	unclassified non-coding RNA gene	Chr15:58845385-58845511 (+)
LP/J	ENSMUSG00230025369	unclassified non-coding RNA gene	Chr15:62405500-62405626 (+)
NOD/ShiLtJ	ENSMUSG00190017252	unclassified non-coding RNA gene	Chr15:59734055-59734181 (-)
NZO/HlLtJ	ENSMUSG00225027212	unclassified non-coding RNA gene	Chr15:62685201-62685327 (+)
PWK/PhJ	ENSLUMG00010029175	unclassified non-coding RNA gene	Chr15:59139481-59139607 (+)
SPRET/EiJ	ENSMSPG00010025591	unclassified non-coding RNA gene	Chr15:60431234-60431360 (+)
WSB/EiJ	ENSIUOG00005006813	unclassified non-coding RNA gene	Chr15:59125173-59125299 (+)

Homology

• Gene Tree
  Gm54430
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Transposon induced
  1
• Genomic Mutations
  1 involving Gm54430
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076986 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076986	Ensembl Gene Model | MGI Sequence Detail	127	C57BL/6J
transcript	ENSMUST00020183002	Ensembl | MGI Sequence Detail	127	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:212391 Uslu VV, et al., Long-range enhancers regulating Myc expression are required for normal facial morphogenesis. Nat Genet. 2014 Jul;46(7):753-8