Gm54423 Gene Detail

Summary

• Symbol
  Gm54423
• Name
  predicted gene, 54423

• Feature Type
  miRNA gene
• IDs
  MGI:6845326
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:19941977-19942062 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  30 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845326	miRNA gene	Chr12:19941977-19942062 (+)
129S1/SvImJ	ENSMUSG00200024472	miRNA gene	Chr12:15296087-15296174 (-)
A/J	ENSMUSG00195018985	miRNA gene	Chr12:17569314-17569399 (-)
AKR/J	ENSMUSG00220028383	miRNA gene	Chr12:16591814-16591899 (+)
BALB/cJ	ENSMUSG00180009778	miRNA gene	Chr12:17555861-17555946 (+)
C3H/HeJ	ENSMUSG00175006123	miRNA gene	Chr12:15094808-15094893 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005005907	miRNA gene	Chr12:17617660-17617745 (+)
CBA/J	ENSMUSG00210007884	miRNA gene	Chr12:15998725-15998810 (-)
DBA/2J	ENSMUSG00185003964	miRNA gene	Chr12:16994583-16994668 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000010730	miRNA gene	Chr12:16842819-16842904 (+)
JF1/MsJ	ENSUMUG00000012340	miRNA gene	Chr12:17165095-17165178 (-)
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005001805	miRNA gene	Chr12:16060736-16060821 (-)

Homology

• Gene Tree
  Gm54423
  

Sequences &
Gene Models

• All Sequences
  14

• Ensembl
  ENSMUSG00002075573 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075573	Ensembl Gene Model | MGI Sequence Detail	86	C57BL/6J
transcript	ENSMUST00020182539	Ensembl | MGI Sequence Detail	86	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;