Gm54422 Gene Detail

Summary

• Symbol
  Gm54422
• Name
  predicted gene, 54422

• Feature Type
  miRNA gene
• IDs
  MGI:6845324
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:90750683-90750756 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845324	miRNA gene	Chr16:90750683-90750756 (+)
129S1/SvImJ	ENSMUSG00200037965	miRNA gene	Chr16:87659587-87659660 (+)
A/J	ENSMUSG00195031094	miRNA gene	Chr16:87436357-87436430 (+)
AKR/J	ENSMUSG00220016152	miRNA gene	Chr16:87626534-87626607 (+)
BALB/cJ	ENSMUSG00180015993	miRNA gene	Chr16:87509706-87509779 (+)
C3H/HeJ	ENSMUSG00175017338	miRNA gene	Chr16:87847068-87847141 (+)
C57BL/6NJ	ENSMUSG00215032705	miRNA gene	Chr16:87637255-87637328 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020386	miRNA gene	Chr16:87178820-87178893 (+)
CBA/J	ENSMUSG00210040888	miRNA gene	Chr16:87738136-87738209 (+)
DBA/2J	ENSMUSG00185035649	miRNA gene	Chr16:87696173-87696246 (+)
FVB/NJ	ENSMUSG00205030737	miRNA gene	Chr16:87466421-87466494 (+)
JF1/MsJ	ENSUMUG00000047621	miRNA gene	Chr16:87826074-87826147 (+)
LP/J	ENSMUSG00230035010	miRNA gene	Chr16:90205091-90205164 (+)
NOD/ShiLtJ	ENSMUSG00190029437	miRNA gene	Chr16:87668205-87668278 (+)
NZO/HlLtJ	ENSMUSG00225031191	miRNA gene	Chr16:93341207-93341280 (+)
PWK/PhJ	ENSLUMG00010014149	miRNA gene	Chr16:87461351-87461424 (+)
SPRET/EiJ	ENSMSPG00010033248	miRNA gene	Chr16:88608943-88609016 (+)
WSB/EiJ	ENSIUOG00005020411	miRNA gene	Chr16:87575967-87576040 (+)

Homology

• Gene Tree
  Gm54422
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076943 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076943	Ensembl Gene Model | MGI Sequence Detail	74	C57BL/6J
transcript	ENSMUST00020181827	Ensembl | MGI Sequence Detail	74	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;