Gm54417 Gene Detail

Summary

• Symbol
  Gm54417
• Name
  predicted gene, 54417

• Feature Type
  miRNA gene
• IDs
  MGI:6845314
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:31523047-31523156 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  21

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845314	miRNA gene	Chr18:31523047-31523156 (-)
129S1/SvImJ	ENSMUSG00200016401	miRNA gene	Chr18:28520419-28520528 (-)
A/J	ENSMUSG00195002417	miRNA gene	Chr18:28714470-28714579 (-)
AKR/J	ENSMUSG00220011463	miRNA gene	Chr18:28672219-28672328 (-)
BALB/cJ	ENSMUSG00180003607	miRNA gene	Chr18:29129826-29129935 (-)
C3H/HeJ	ENSMUSG00175018298	miRNA gene	Chr16:50732323-50732428 (-)
C3H/HeJ	ENSMUSG00175023974	miRNA gene	Chr18:28668493-28668602 (-)
C57BL/6NJ	ENSMUSG00215024499	miRNA gene	Chr18:28392815-28392924 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016262	miRNA gene	Chr18:28306914-28307019 (-)
CBA/J	ENSMUSG00210016337	miRNA gene	Chr18:28703727-28703836 (-)
CBA/J	ENSMUSG00210019830	miRNA gene	Chr16:50699998-50700103 (-)
DBA/2J	ENSMUSG00185022732	miRNA gene	Chr18:28647786-28647895 (-)
FVB/NJ	ENSMUSG00205013733	miRNA gene	Chr16:50501320-50501425 (-)
FVB/NJ	ENSMUSG00205022610	miRNA gene	Chr18:28381768-28381877 (-)
JF1/MsJ	ENSUMUG00000027010	miRNA gene	Chr18:28748699-28748808 (-)
LP/J	ENSMUSG00230049127	miRNA gene	Chr18:30707876-30707985 (-)
NOD/ShiLtJ	ENSMUSG00190007022	miRNA gene	Chr18:28442005-28442114 (-)
NZO/HlLtJ	ENSMUSG00225047855	miRNA gene	Chr18:30645590-30645699 (-)
PWK/PhJ	ENSLUMG00010003804	miRNA gene	Chr18:28909189-28909298 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005009687	miRNA gene	Chr16:50806349-50806454 (-)
WSB/EiJ	ENSIUOG00005002790	miRNA gene	Chr18:28413445-28413554 (-)

Homology

• Gene Tree
  Gm54417
  

Sequences &
Gene Models

• All Sequences
  23

• Ensembl
  ENSMUSG00002075774 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075774	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020182292	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;