Gm54416 Gene Detail

Summary

• Symbol
  Gm54416
• Name
  predicted gene, 54416

• Feature Type
  miRNA gene
• IDs
  MGI:6845312
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:103883685-103883785 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  122 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845312	miRNA gene	Chr15:103883685-103883785 (-)
129S1/SvImJ	ENSMUSG00200052893	miRNA gene	Chr15:101112372-101112472 (-)
A/J	ENSMUSG00195046039	miRNA gene	Chr15:100982660-100982760 (-)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180047357	miRNA gene	Chr15:100875053-100875153 (-)
C3H/HeJ	ENSMUSG00175047698	miRNA gene	Chr15:101193747-101193847 (-)
C57BL/6NJ	ENSMUSG00215052048	miRNA gene	Chr15:100925337-100925437 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005047970	miRNA gene	Chr15:100427367-100427467 (-)
CBA/J	ENSMUSG00210032634	miRNA gene	Chr15:100935605-100935705 (-)
DBA/2J	ENSMUSG00185042440	miRNA gene	Chr15:101035136-101035236 (-)
FVB/NJ	ENSMUSG00205047973	miRNA gene	Chr15:100660355-100660455 (-)
JF1/MsJ	ENSUMUG00000057246	miRNA gene	Chr15:100456107-100456207 (-)
LP/J	ENSMUSG00230006920	miRNA gene	Chr15:104323249-104323349 (-)
NOD/ShiLtJ	ENSMUSG00190049986	miRNA gene	Chr15:100979864-100979964 (-)
NZO/HlLtJ	ENSMUSG00225028269	miRNA gene	Chr15:104505560-104505660 (-)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010050816	miRNA gene	Chr15:102216663-102216675 (-)
WSB/EiJ	ENSIUOG00005042928	miRNA gene	Chr15:101040495-101040595 (-)

Homology

• Gene Tree
  Gm54416
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002075939 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075939	Ensembl Gene Model | MGI Sequence Detail	101	C57BL/6J
transcript	ENSMUST00020183421	Ensembl | MGI Sequence Detail	101	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;