Gm54415 Gene Detail

Summary

• Symbol
  Gm54415
• Name
  predicted gene, 54415

• Feature Type
  miRNA gene
• IDs
  MGI:6845310
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:105469663-105469772 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  87 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845310	miRNA gene	ChrX:105469663-105469772 (+)
129S1/SvImJ	ENSMUSG00200039167	miRNA gene	ChrX:87253023-87253132 (+)
A/J	ENSMUSG00195040387	miRNA gene	ChrX:90983387-90983496 (+)
AKR/J	ENSMUSG00220040613	miRNA gene	ChrX:85707135-85707244 (+)
BALB/cJ	ENSMUSG00180043832	miRNA gene	ChrX:87649513-87649622 (+)
C3H/HeJ	ENSMUSG00175044117	miRNA gene	ChrX:91225349-91225458 (+)
C57BL/6NJ	ENSMUSG00215046729	miRNA gene	ChrX:87878828-87878937 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005042493	miRNA gene	ChrX:88681732-88681841 (+)
CBA/J	ENSMUSG00210046446	miRNA gene	ChrX:88118953-88119062 (+)
DBA/2J	ENSMUSG00185045524	miRNA gene	ChrX:100592124-100592233 (+)
FVB/NJ	ENSMUSG00205036788	miRNA gene	ChrX:87194719-87194828 (+)
JF1/MsJ	ENSUMUG00000042720	miRNA gene	ChrX:121187564-121187673 (+)
LP/J	ENSMUSG00230043657	miRNA gene	ChrX:107250366-107250475 (+)
NOD/ShiLtJ	ENSMUSG00190044700	miRNA gene	ChrX:87330730-87330839 (+)
NZO/HlLtJ	ENSMUSG00225040645	miRNA gene	ChrX:112396254-112396363 (+)
PWK/PhJ	ENSLUMG00010037888	miRNA gene	ChrX:86445427-86445536 (+)
SPRET/EiJ	ENSMSPG00010043612	miRNA gene	ChrX:90505316-90505426 (+)
SPRET/EiJ	ENSMSPG00010041640	miRNA gene	ChrX:90719449-90719558 (+)
WSB/EiJ	ENSIUOG00005043326	miRNA gene	ChrX:87835158-87835267 (+)

Homology

• Gene Tree
  Gm54415
  

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00002076096 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076096	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020182196	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;