Gm54413 Gene Detail

Summary

• Symbol
  Gm54413
• Name
  predicted gene, 54413

• Feature Type
  miRNA gene
• IDs
  MGI:6845306
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:82497088-82497147 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  134 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845306	miRNA gene	Chr15:82497088-82497147 (-)
129S1/SvImJ	ENSMUSG00200053898	miRNA gene	Chr15:79610813-79610872 (-)
A/J	ENSMUSG00195051737	miRNA gene	Chr15:79542469-79542528 (-)
AKR/J	ENSMUSG00220053009	miRNA gene	Chr15:79585648-79585707 (-)
BALB/cJ	ENSMUSG00180054035	miRNA gene	Chr15:79419397-79419456 (-)
C3H/HeJ	ENSMUSG00175053002	miRNA gene	Chr15:79730369-79730428 (-)
C57BL/6NJ	ENSMUSG00215053211	miRNA gene	Chr15:79514675-79514734 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048946	miRNA gene	Chr15:78999126-78999185 (-)
CBA/J	ENSMUSG00210049426	miRNA gene	Chr15:79505457-79505516 (-)
DBA/2J	ENSMUSG00185052078	miRNA gene	Chr15:79529267-79529326 (-)
FVB/NJ	ENSMUSG00205052943	miRNA gene	Chr15:79273099-79273158 (-)
JF1/MsJ	ENSUMUG00000056874	miRNA gene	Chr15:79069858-79069917 (-)
LP/J	ENSMUSG00230045703	miRNA gene	Chr15:82851174-82851233 (-)
NOD/ShiLtJ	ENSMUSG00190053559	miRNA gene	Chr15:79522549-79522608 (-)
NZO/HlLtJ	ENSMUSG00225050175	miRNA gene	Chr15:83189733-83189792 (-)
PWK/PhJ	ENSLUMG00010052833	miRNA gene	Chr15:79280175-79280234 (-)
SPRET/EiJ	ENSMSPG00010051153	miRNA gene	Chr15:80945241-80945300 (-)
WSB/EiJ	ENSIUOG00005050794	miRNA gene	Chr15:79593898-79593957 (-)

Homology

• Gene Tree
  Gm54413
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075376 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075376	Ensembl Gene Model | MGI Sequence Detail	60	C57BL/6J
transcript	ENSMUST00020182672	Ensembl | MGI Sequence Detail	60	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;