Gm54410 Gene Detail

Summary

• Symbol
  Gm54410
• Name
  predicted gene, 54410

• Feature Type
  miRNA gene
• IDs
  MGI:6845300
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:41038139-41038198 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  126 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845300	miRNA gene	Chr16:41038139-41038198 (+)
129S1/SvImJ	ENSMUSG00200029714	miRNA gene	Chr16:37962945-37963004 (+)
A/J	ENSMUSG00195011239	miRNA gene	Chr16:37507725-37507784 (+)
AKR/J	ENSMUSG00220030143	miRNA gene	Chr16:37866840-37866899 (+)
BALB/cJ	ENSMUSG00180013295	miRNA gene	Chr16:37715909-37715968 (+)
C3H/HeJ	ENSMUSG00175033438	miRNA gene	Chr16:37978867-37978926 (+)
C57BL/6NJ	ENSMUSG00215022520	miRNA gene	Chr16:37811021-37811080 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032815	miRNA gene	Chr16:38264079-38264138 (+)
CBA/J	ENSMUSG00210029225	miRNA gene	Chr16:38016783-38016842 (+)
DBA/2J	ENSMUSG00185024925	miRNA gene	Chr16:37903017-37903076 (+)
FVB/NJ	ENSMUSG00205028835	miRNA gene	Chr16:37844414-37844473 (+)
JF1/MsJ	ENSUMUG00000040515	miRNA gene	Chr16:38126420-38126479 (+)
LP/J	ENSMUSG00230033854	miRNA gene	Chr16:40491829-40491888 (+)
NOD/ShiLtJ	ENSMUSG00190024546	miRNA gene	Chr16:38005838-38005897 (+)
NZO/HlLtJ	ENSMUSG00225028896	miRNA gene	Chr16:43574391-43574450 (+)
PWK/PhJ	ENSLUMG00010029893	miRNA gene	Chr16:38016159-38016161 (+)
SPRET/EiJ	ENSMSPG00010017191	miRNA gene	Chr16:38058412-38058470 (+)
WSB/EiJ	ENSIUOG00005027829	miRNA gene	Chr16:38128579-38128638 (+)

Homology

• Gene Tree
  Gm54410
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076645 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076645	Ensembl Gene Model | MGI Sequence Detail	60	C57BL/6J
transcript	ENSMUST00020182964	Ensembl | MGI Sequence Detail	60	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;