Gm54408 Gene Detail

Summary

• Symbol
  Gm54408
• Name
  predicted gene, 54408

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845296
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:40886788-40886938 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  134 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845296	unclassified non-coding RNA gene	Chr16:40886788-40886938 (-)
129S1/SvImJ	ENSMUSG00200030458	unclassified non-coding RNA gene	Chr16:37811623-37811773 (-)
A/J	ENSMUSG00195011278	unclassified non-coding RNA gene	Chr16:37362869-37363019 (-)
AKR/J	ENSMUSG00220031044	unclassified non-coding RNA gene	Chr16:37722001-37722151 (-)
BALB/cJ	ENSMUSG00180013512	unclassified non-coding RNA gene	Chr16:37571038-37571188 (-)
C3H/HeJ	ENSMUSG00175034272	unclassified non-coding RNA gene	Chr16:37827545-37827695 (-)
C57BL/6NJ	ENSMUSG00215026827	unclassified non-coding RNA gene	Chr16:37659658-37659808 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033909	unclassified non-coding RNA gene	Chr16:38119973-38120123 (-)
CBA/J	ENSMUSG00210029393	unclassified non-coding RNA gene	Chr16:37865503-37865653 (-)
DBA/2J	ENSMUSG00185025219	unclassified non-coding RNA gene	Chr16:37758159-37758309 (-)
FVB/NJ	ENSMUSG00205028305	unclassified non-coding RNA gene	Chr16:37699568-37699718 (-)
JF1/MsJ	ENSUMUG00000041096	unclassified non-coding RNA gene	Chr16:37974745-37974895 (-)
LP/J	ENSMUSG00230033859	unclassified non-coding RNA gene	Chr16:40340504-40340654 (-)
NOD/ShiLtJ	ENSMUSG00190024178	unclassified non-coding RNA gene	Chr16:37861009-37861159 (-)
NZO/HlLtJ	ENSMUSG00225028897	unclassified non-coding RNA gene	Chr16:43423016-43423166 (-)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010018592	unclassified non-coding RNA gene	Chr16:37897578-37897728 (-)
WSB/EiJ	ENSIUOG00005026722	unclassified non-coding RNA gene	Chr16:37984371-37984521 (-)

Homology

• Gene Tree
  Gm54408
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002076090 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076090	Ensembl Gene Model | MGI Sequence Detail	151	C57BL/6J
transcript	ENSMUST00020182544	Ensembl | MGI Sequence Detail	151	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;