Gm54403 Gene Detail

Summary

• Symbol
  Gm54403
• Name
  predicted gene, 54403

• Feature Type
  miRNA gene
• IDs
  MGI:6845286
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:39275377-39275497 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845286	miRNA gene	Chr16:39275377-39275497 (+)
129S1/SvImJ	ENSMUSG00200030172	miRNA gene	Chr16:36203744-36203864 (+)
A/J	ENSMUSG00195011470	miRNA gene	Chr16:35755030-35755150 (+)
AKR/J	ENSMUSG00220030387	miRNA gene	Chr16:36124603-36124723 (+)
BALB/cJ	ENSMUSG00180013474	miRNA gene	Chr16:35963345-35963465 (+)
C3H/HeJ	ENSMUSG00175033487	miRNA gene	Chr16:36209397-36209517 (+)
C57BL/6NJ	ENSMUSG00215025735	miRNA gene	Chr16:36047475-36047595 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033693	miRNA gene	Chr16:36497869-36497989 (+)
CBA/J	ENSMUSG00210028841	miRNA gene	Chr16:36247507-36247627 (+)
DBA/2J	ENSMUSG00185025077	miRNA gene	Chr16:36150487-36150607 (+)
FVB/NJ	ENSMUSG00205027915	miRNA gene	Chr16:36106553-36106673 (+)
JF1/MsJ	ENSUMUG00000040849	miRNA gene	Chr16:36395773-36395893 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190023614	miRNA gene	Chr16:36257356-36257476 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010030396	miRNA gene	Chr16:36294856-36294976 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005027617	miRNA gene	Chr16:36382673-36382793 (+)

Homology

• Gene Tree
  Gm54403
  

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00002076331 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076331	Ensembl Gene Model | MGI Sequence Detail	121	C57BL/6J
transcript	ENSMUST00020183603	Ensembl | MGI Sequence Detail	121	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;