Gm54402 Gene Detail

Summary

• Symbol
  Gm54402
• Name
  predicted gene, 54402

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845284
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:25731202-25731511 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845284	unclassified non-coding RNA gene	Chr18:25731202-25731511 (-)
129S1/SvImJ	ENSMUSG00200016439	unclassified non-coding RNA gene	Chr18:22728423-22728732 (-)
A/J	ENSMUSG00195002492	unclassified non-coding RNA gene	Chr18:22896657-22896966 (-)
AKR/J	ENSMUSG00220011486	unclassified non-coding RNA gene	Chr18:22884383-22884692 (-)
BALB/cJ	ENSMUSG00180003614	unclassified non-coding RNA gene	Chr18:23336883-23337192 (-)
C3H/HeJ	ENSMUSG00175024618	unclassified non-coding RNA gene	Chr18:22863411-22863720 (-)
C57BL/6NJ	ENSMUSG00215025613	unclassified non-coding RNA gene	Chr18:22588616-22588925 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016416	unclassified non-coding RNA gene	Chr18:22567938-22568247 (-)
CBA/J	ENSMUSG00210016239	unclassified non-coding RNA gene	Chr18:22887578-22887887 (-)
DBA/2J	ENSMUSG00185023341	unclassified non-coding RNA gene	Chr18:22835617-22835926 (-)
FVB/NJ	ENSMUSG00205025212	unclassified non-coding RNA gene	Chr18:22553923-22554232 (-)
JF1/MsJ	ENSUMUG00000029185	unclassified non-coding RNA gene	Chr18:22929221-22929530 (-)
LP/J	ENSMUSG00230006227	unclassified non-coding RNA gene	Chr18:24924257-24924566 (-)
NOD/ShiLtJ	ENSMUSG00190007195	unclassified non-coding RNA gene	Chr18:22643886-22644195 (-)
NZO/HlLtJ	ENSMUSG00225025665	unclassified non-coding RNA gene	Chr18:24887682-24887991 (-)
PWK/PhJ	ENSLUMG00010003695	unclassified non-coding RNA gene	Chr18:23117929-23118238 (-)
SPRET/EiJ	ENSMSPG00010022604	unclassified non-coding RNA gene	Chr18:23012738-23013095 (-)
WSB/EiJ	ENSIUOG00005002898	unclassified non-coding RNA gene	Chr18:22667089-22667398 (-)

Homology

• Gene Tree
  Gm54402
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074964 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074964	Ensembl Gene Model | MGI Sequence Detail	310	C57BL/6J
transcript	ENSMUST00020182188	Ensembl | MGI Sequence Detail	310	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;