Gm54399 Gene Detail

Summary

• Symbol
  Gm54399
• Name
  predicted gene, 54399

• Feature Type
  miRNA gene
• IDs
  MGI:6845278
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:82388797-82388856 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  73 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845278	miRNA gene	Chr15:82388797-82388856 (+)
129S1/SvImJ	ENSMUSG00200053879	miRNA gene	Chr15:79502520-79502579 (+)
A/J	ENSMUSG00195051891	miRNA gene	Chr15:79434181-79434240 (+)
AKR/J	ENSMUSG00220053039	miRNA gene	Chr15:79477356-79477415 (+)
BALB/cJ	ENSMUSG00180053937	miRNA gene	Chr15:79311110-79311169 (+)
C3H/HeJ	ENSMUSG00175053384	miRNA gene	Chr15:79622076-79622135 (+)
C57BL/6NJ	ENSMUSG00215053236	miRNA gene	Chr15:79406386-79406445 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210049002	miRNA gene	Chr15:79397160-79397219 (+)
DBA/2J	ENSMUSG00185052248	miRNA gene	Chr15:79420963-79421022 (+)
FVB/NJ	ENSMUSG00205051240	miRNA gene	Chr15:79167018-79167077 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230045737	miRNA gene	Chr15:82742882-82742941 (+)
NOD/ShiLtJ	ENSMUSG00190053952	miRNA gene	Chr15:79414260-79414319 (+)
NZO/HlLtJ	ENSMUSG00225050197	miRNA gene	Chr15:83081443-83081502 (+)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010050891	miRNA gene	Chr15:80857960-80858019 (+)
WSB/EiJ	ENSIUOG00005050292	miRNA gene	Chr15:79498814-79498873 (+)

Homology

• Gene Tree
  Gm54399
  

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00002076338 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076338	Ensembl Gene Model | MGI Sequence Detail	60	C57BL/6J
transcript	ENSMUST00020181995	Ensembl | MGI Sequence Detail	60	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;