Gm54394 Gene Detail

Summary

• Symbol
  Gm54394
• Name
  predicted gene, 54394

• Feature Type
  miRNA gene
• IDs
  MGI:6845268
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:82292659-82292744 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  73 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845268	miRNA gene	Chr15:82292659-82292744 (+)
129S1/SvImJ	ENSMUSG00200053825	miRNA gene	Chr15:79406343-79406428 (+)
A/J	ENSMUSG00195051531	miRNA gene	Chr15:79338006-79338091 (+)
AKR/J	ENSMUSG00220053360	miRNA gene	Chr15:79381173-79381258 (+)
BALB/cJ	ENSMUSG00180053510	miRNA gene	Chr15:79214945-79215030 (+)
C3H/HeJ	ENSMUSG00175053290	miRNA gene	Chr15:79525908-79525993 (+)
C57BL/6NJ	ENSMUSG00215053094	miRNA gene	Chr15:79310242-79310327 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005047630	miRNA gene	Chr15:78826719-78826804 (+)
CBA/J	ENSMUSG00210050100	miRNA gene	Chr15:79301002-79301087 (+)
DBA/2J	ENSMUSG00185052159	miRNA gene	Chr15:79324831-79324916 (+)
FVB/NJ	ENSMUSG00205051364	miRNA gene	Chr15:79061384-79061469 (+)
JF1/MsJ	ENSUMUG00000056525	miRNA gene	Chr15:78899742-78899827 (+)
LP/J	ENSMUSG00230045783	miRNA gene	Chr15:82646724-82646809 (+)
NOD/ShiLtJ	ENSMUSG00190053414	miRNA gene	Chr15:79318100-79318185 (+)
NZO/HlLtJ	ENSMUSG00225050216	miRNA gene	Chr15:82985268-82985353 (+)
PWK/PhJ	ENSLUMG00010052297	miRNA gene	Chr15:79110658-79110743 (+)
SPRET/EiJ	ENSMSPG00010051629	miRNA gene	Chr15:80756481-80756567 (+)
WSB/EiJ	ENSIUOG00005050868	miRNA gene	Chr15:79402972-79403057 (+)

Homology

• Gene Tree
  Gm54394
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074994 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074994	Ensembl Gene Model | MGI Sequence Detail	86	C57BL/6J
transcript	ENSMUST00020182609	Ensembl | MGI Sequence Detail	86	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;