Gm54393 Gene Detail

Summary

• Symbol
  Gm54393
• Name
  predicted gene, 54393

• Feature Type
  miRNA gene
• IDs
  MGI:6845266
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:82291295-82291354 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  104 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845266	miRNA gene	Chr15:82291295-82291354 (-)
129S1/SvImJ	ENSMUSG00200054067	miRNA gene	Chr15:79404979-79405038 (-)
A/J	ENSMUSG00195052140	miRNA gene	Chr15:79336642-79336701 (-)
AKR/J	ENSMUSG00220052935	miRNA gene	Chr15:79379809-79379868 (-)
BALB/cJ	ENSMUSG00180053411	miRNA gene	Chr15:79213581-79213640 (-)
C3H/HeJ	ENSMUSG00175053027	miRNA gene	Chr15:79524544-79524603 (-)
C57BL/6NJ	ENSMUSG00215053166	miRNA gene	Chr15:79308878-79308937 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048297	miRNA gene	Chr15:78825357-78825416 (-)
CBA/J	ENSMUSG00210049366	miRNA gene	Chr15:79299638-79299697 (-)
DBA/2J	ENSMUSG00185051682	miRNA gene	Chr15:79323467-79323526 (-)
FVB/NJ	ENSMUSG00205051857	miRNA gene	Chr15:79060021-79060080 (-)
JF1/MsJ	ENSUMUG00000056861	miRNA gene	Chr15:78898378-78898437 (-)
LP/J	ENSMUSG00230045984	miRNA gene	Chr15:82645360-82645419 (-)
NOD/ShiLtJ	ENSMUSG00190053579	miRNA gene	Chr15:79316736-79316795 (-)
NZO/HlLtJ	ENSMUSG00225050311	miRNA gene	Chr15:82983904-82983963 (-)
PWK/PhJ	ENSLUMG00010052578	miRNA gene	Chr15:79109295-79109354 (-)
SPRET/EiJ	ENSMSPG00010051542	miRNA gene	Chr15:80755112-80755171 (-)
WSB/EiJ	ENSIUOG00005050537	miRNA gene	Chr15:79401608-79401667 (-)

Homology

• Gene Tree
  Gm54393
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076453 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076453	Ensembl Gene Model | MGI Sequence Detail	60	C57BL/6J
transcript	ENSMUST00020182863	Ensembl | MGI Sequence Detail	60	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;