Gm54390 Gene Detail

Summary

• Symbol
  Gm54390
• Name
  predicted gene, 54390

• Feature Type
  miRNA gene
• IDs
  MGI:6845260
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:97286917-97287021 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  142 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845260	miRNA gene	Chr14:97286917-97287021 (-)
129S1/SvImJ	ENSMUSG00200019663	miRNA gene	Chr14:85814737-85814841 (-)
A/J	ENSMUSG00195019670	miRNA gene	Chr14:86006545-86006649 (-)
AKR/J	ENSMUSG00220002372	miRNA gene	Chr14:85404589-85404693 (-)
BALB/cJ	ENSMUSG00180004623	miRNA gene	Chr14:85489715-85489819 (-)
C3H/HeJ	ENSMUSG00175002645	miRNA gene	Chr14:87355853-87355957 (-)
C57BL/6NJ	ENSMUSG00215021300	miRNA gene	Chr14:85519651-85519755 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016512	miRNA gene	Chr14:86992302-86992406 (-)
CBA/J	ENSMUSG00210007841	miRNA gene	Chr14:86045384-86045488 (-)
DBA/2J	ENSMUSG00185015405	miRNA gene	Chr14:91219350-91219454 (-)
FVB/NJ	ENSMUSG00205014253	miRNA gene	Chr14:85125549-85125653 (-)
JF1/MsJ	ENSUMUG00000013194	miRNA gene	Chr14:102180433-102180537 (-)
LP/J	ENSMUSG00230005372	miRNA gene	Chr14:103054299-103054403 (-)
NOD/ShiLtJ	ENSMUSG00190009614	miRNA gene	Chr14:85808689-85808793 (-)
NZO/HlLtJ	ENSMUSG00225025188	miRNA gene	Chr14:93462603-93462707 (-)
PWK/PhJ	ENSLUMG00010004759	miRNA gene	Chr14:85075439-85075543 (-)
SPRET/EiJ	ENSMSPG00010009431	miRNA gene	Chr14:88844728-88844832 (-)
WSB/EiJ	ENSIUOG00005018492	miRNA gene	Chr14:85008854-85008958 (-)

Homology

• Gene Tree
  Gm54390
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000119804 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000119804	Ensembl Gene Model | MGI Sequence Detail	105	C57BL/6J
transcript	ENSMUST00000239597	Ensembl | MGI Sequence Detail	105	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;